CX069727

Overview
NameCX069727
Unique NameCX069727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069727_ssr789 microsatellite CX069727_ssr789:789..798. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_CRYNE (Mitogen-activated protein kinase HOG1 OS=Cryptococcus neoformans GN=HOG1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 2
Query:  134 YVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            +V+ +I G +F+V+++YV  LQP+G GA+G+VCSA +  +   VAIKKI   F   + +KR  RE+KLL H+ HEN+ +
Sbjct:    4 FVKLSIFGTVFEVTTRYVD-LQPVGMGAFGLVCSAKDQLSGTSVAIKKIMKPFSTPVLSKRTYRELKLLKHLRHENIIS 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_CANGA (Mitogen-activated protein kinase HOG1 OS=Candida glabrata GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 34/78 (43.59%), Postives = 55/78 (70.51%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENV 364
            ++++  I G +F+++++Y   L P+G GA+G+VCSA ++ T ++VAIKKI   F   + AKR  RE+KLL H+ HEN+
Sbjct:    6 EFIRTQIFGTVFEITNRY-SDLNPVGMGAFGLVCSATDTLTNQQVAIKKIMKPFATAVLAKRTYRELKLLKHLRHENL 82          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_BOTFB (Mitogen-activated protein kinase hog1 OS=Botryotinia fuckeliana (strain B05.10) GN=hog1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA ++ T   VA+KKI   F   + +KR  RE+KLL H+ HENV +
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSAKDNLTGSNVAVKKIMKPFSTPVLSKRTYRELKLLKHLKHENVIS 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_ASPTN (Mitogen-activated protein kinase hog1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hog1 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VA+KKI   F   + +KR  RE+KLL H+ HEN+ +
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSAKDQLTGQPVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIIS 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: MPKC_NEOFI (Mitogen-activated protein kinase mpkC OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mpkc PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 37/78 (47.44%), Postives = 56/78 (71.79%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENV 364
            ++V+  ILG  F+ +++YV P QPIG G++G+VCSA +  T++ VA+KKI   FD+   AKR  REI+LL ++ HEN+
Sbjct:    3 EFVRAEILGTKFEYTTRYVNP-QPIGMGSFGLVCSAFDQITQQPVALKKIMKPFDSSSLAKRTYREIRLLKYLRHENL 79          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: MPKC_ASPNC (Mitogen-activated protein kinase mpkC OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mpkC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENV 364
            ++++  ILG  F+ +++Y   LQP+G GA+G+VCSA +  T++ VAIKK+   F N   AKR  RE+KLL H+ HEN+
Sbjct:    3 EFLRSQILGTTFETTNRY-SDLQPVGLGAFGLVCSAYDMITRQPVAIKKMMKPFSNATLAKRTYREVKLLKHLRHENL 79          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_TRIAT (Mitogen-activated protein kinase hog1 OS=Trichoderma atroviride GN=hog1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VA+KK+   F   + AKR  RE+KL  H+ HENV +
Sbjct:    3 EFVRAQIFGTTFEITSRY-SDLQPVGMGAFGLVCSARDQLTNQNVAVKKLMKPFSTPVLAKRTYRELKLFKHLRHENVIS 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_NEOFI (Mitogen-activated protein kinase hog1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hog1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VA+KKI   F   + +KR  RE+KLL H+ HEN+ +
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSARDQLTGQPVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIIS 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENV 364
            ++++  I G +F+++++Y   L P+G GA+G+VCSA ++ T + VAIKKI   F   + AKR  RE+KLL H+ HEN+
Sbjct:    5 EFIRTQIFGTVFEITNRYTN-LNPVGMGAFGLVCSATDTLTSQPVAIKKIMKPFSTSVLAKRTYRELKLLKHLRHENL 81          
BLAST of CX069727 vs. ExPASy Swiss-Prot
Match: HOG1_ASPNC (Mitogen-activated protein kinase hog1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=hog1 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 2
Query:  131 KYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMNHENVFT 370
            ++V+  I G  F+++S+Y   LQP+G GA+G+VCSA +  T + VA+KKI   F   + +KR  RE+KLL H+ HEN+ +
Sbjct:    3 EFVRAQIFGTTFEITSRYTD-LQPVGMGAFGLVCSARDQLTGQPVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIIS 81          
The following BLAST results are available for this feature:
BLAST of CX069727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
HOG1_CRYNE4.152e-1345.57Mitogen-activated protein kinase HOG1 OS=Cryptococ... [more]
HOG1_CANGA4.152e-1343.59Mitogen-activated protein kinase HOG1 OS=Candida g... [more]
HOG1_BOTFB4.152e-1345.00Mitogen-activated protein kinase hog1 OS=Botryotin... [more]
HOG1_ASPTN4.152e-1343.75Mitogen-activated protein kinase hog1 OS=Aspergill... [more]
MPKC_NEOFI5.423e-1347.44Mitogen-activated protein kinase mpkC OS=Neosartor... [more]
MPKC_ASPNC5.423e-1346.15Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
HOG1_TRIAT5.423e-1343.75Mitogen-activated protein kinase hog1 OS=Trichoder... [more]
HOG1_NEOFI5.423e-1343.75Mitogen-activated protein kinase hog1 OS=Neosartor... [more]
HOG1_KLULA5.423e-1343.59Mitogen-activated protein kinase HOG1 OS=Kluyverom... [more]
HOG1_ASPNC5.423e-1343.75Mitogen-activated protein kinase hog1 OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12D10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12D10-H20-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069727 ID=CX069727; Name=CX069727; organism=Citrus sinensis; type=EST; length=832bp
GGCTTTACTTAAAAACGCGAGAACTCTTATCTTCTTTCTCATTCTTCTTC
GGCTTAAAAGTTGGTTTTTAAAAAAAATGGAGAACGAATCGATGGTGATG
AAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACAATAT
TCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTACGTTCCTCCTCTTCAGC
CTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTCAGAG
ACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATAACAG
GATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCACATGA
ATCATGAGAATGTATTTACTTCTGTAAACTTATAGGCTTGTTTACTGTCC
TGTGTTTTTCTAGCATTATTACTCTACTTTCACTTGCAAATCCCTGCTTC
TGATAAAAAGATGTTTTCCTAGAATTGCCTATATATATGTGTCTGGATTA
ATGATCTAGTGGGCGATGTTGCTCATGTTATGGTGAGCCATGCTGCTATG
TGGTGTGCTCTAGTTATCTATAGCTTCAACTCTATCTTTAAGGTGTTATA
GAATCATGTCATGTTTGCAGTTGCTCAATAGATCATTTTTCTGTGTATAC
ATATCCACACACAACAAATGATCTGGTAAGTGCAGTTCTATAATGCCTTG
TTAATGGTGTTGAAGTTGTTTAATCTGACAGGCCAACATGACAGTGTTGC
TCACTATAACGTGAGCAACGTCACCTATTAGATCATTACTCTCTCTCTAT
ATATAAGAATTCTAAAGTGTAGACATCTATTA
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