DR404003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_DRIGR (Photosystem II reaction center protein K OS=Drimys granadensis GN=psbK PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.630e-24 Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLNIFSL+ ICLNSAL+SSSF FAKLPEAYAF NPIVD MPVIPVLFFLLA VWQAAVSFR Sbjct: 1 MLNIFSLICICLNSALHSSSFFFAKLPEAYAFFNPIVDFMPVIPVLFFLLALVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_DAUCA (Photosystem II reaction center protein K OS=Daucus carota GN=psbK PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.630e-24 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLNIFSL+ ICLNSA YSSS FAKLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSAFYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_SOLTU (Photosystem II reaction center protein K OS=Solanum tuberosum GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_SOLLC (Photosystem II reaction center protein K OS=Solanum lycopersicum GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_SOLBU (Photosystem II reaction center protein K OS=Solanum bulbocastanum GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_ATRBE (Photosystem II reaction center protein K OS=Atropa belladonna GN=psbK PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.302e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_EUCGG (Photosystem II reaction center protein K OS=Eucalyptus globulus subsp. globulus GN=psbK PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.700e-23 Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLNIFSL+ ICL+S LYSSSF AKLPEAYAFLNPIVD MPVIP+LFFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLHSTLYSSSFFLAKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_TOBAC (Photosystem II reaction center protein K OS=Nicotiana tabacum GN=psbK PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.787e-23 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLN FSL+ ICLNS L+SSSF F KLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_SOYBN (Photosystem II reaction center protein K OS=Glycine max GN=psbK PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.787e-23 Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLNIF+L+ IC++S LYSSSF AKLPEAYAFLNPIVD+MPVIP+LFFLLAFVWQAAVSFR Sbjct: 1 MLNIFNLVCICIHSVLYSSSFFSAKLPEAYAFLNPIVDIMPVIPLLFFLLAFVWQAAVSFR 61
BLAST of DR404003 vs. ExPASy Swiss-Prot
Match: PSBK_POPAL (Photosystem II reaction center protein K OS=Populus alba GN=psbK PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.787e-23 Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 2 Query: 182 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 364 MLNI +L+ ICLN ALYSSSF F KLPEAYAFLNPIVDVMPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNILNLICICLNFALYSSSFFFTKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of DR404003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404003 ID=DR404003; Name=DR404003; organism=Citrus sinensis; type=EST; length=422bpback to top |