CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CUCSA (30S ribosomal protein S11, chloroplastic OS=Cucumis sativus GN=rps11 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRGVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_VITVI (30S ribosomal protein S11, chloroplastic OS=Vitis vinifera GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PLAOC (30S ribosomal protein S11, chloroplastic OS=Platanus occidentalis GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGACGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PIPCE (30S ribosomal protein S11, chloroplastic OS=Piper cenocladum GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PANGI (30S ribosomal protein S11, chloroplastic OS=Panax ginseng GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_MANES (30S ribosomal protein S11, chloroplastic OS=Manihot esculenta GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVT+TDVRGRVISWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTITDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ILLOL (30S ribosomal protein S11, chloroplastic OS=Illicium oligandrum GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGARRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_DRIGR (30S ribosomal protein S11, chloroplastic OS=Drimys granadensis GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 19 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_DAUCA (30S ribosomal protein S11, chloroplastic OS=Daucus carota GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CHLSC (30S ribosomal protein S11, chloroplastic OS=Chloranthus spicatus GN=rps11 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |