CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_PROM0 (30S ribosomal protein S11 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpsK PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV+H+Q++FNNTIV++TD G VISWSSA PFAAQTAA A R DQGM++ EV+++GPG GR+ A+R Sbjct: 20 GVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAARRALDQGMRQIEVLVRGPGAGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CRYJA (30S ribosomal protein S11, chloroplastic OS=Cryptomeria japonica GN=rps11 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQG-MQRAEVMIKGPGLGRDAALR 886 KGVI+V+ASF NTIVTVTD RG+ +SWSSA PFAAQTAA N + + +QG ++ AEVMI GPG GRD ALR Sbjct: 20 KGVIYVRASFRNTIVTVTDTRGQAVSWSSAGACGFKGTKRRSPFAAQTAAANVVDTLVNQGLLKEAEVMISGPGPGRDTALR 101
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CHAVU (30S ribosomal protein S11, chloroplastic OS=Chara vulgaris GN=rps11 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVT+TD+RG+VISWSS+ +AAQ A NAI+ DQ ++AEVM+ GPG GR+ ALR Sbjct: 19 KGVIHIQASFNNTIVTITDLRGQVISWSSSGACGFKGAKKSTAYAAQIATENAIKQWTDQNTKQAEVMMSGPGPGRETALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_PROM9 (30S ribosomal protein S11 OS=Prochlorococcus marinus (strain MIT 9312) GN=rpsK PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV+H+Q++FNNTIV++TD G VISWSSA PFAAQTAA A R DQGM++ EV+++GPG GR+ A+R Sbjct: 20 GVVHIQSTFNNTIVSITDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAARRALDQGMRQIEVLVRGPGSGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_MICAN (30S ribosomal protein S11 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsK PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18 Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV H+Q++FNNTIVT+ D +G VISW+SA PFAAQTAA NA R +QGM++ EVM+ GPG GR+ A+R Sbjct: 20 GVAHIQSTFNNTIVTIADTKGDVISWASAGSSGFKGAKKGTPFAAQTAADNAARRAIEQGMRQLEVMVSGPGAGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_THEEB (30S ribosomal protein S11 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsK PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV H+Q++FNNTIV++TD G VI+W+SA PFAAQTAA NA R DQGM++ EVM+ GPG GR+ A+R Sbjct: 20 GVAHIQSTFNNTIVSITDPNGEVIAWASAGSSGFKGAKKGTPFAAQTAADNAARRAIDQGMRQIEVMVSGPGSGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_SYNY3 (30S ribosomal protein S11 OS=Synechocystis sp. (strain PCC 6803) GN=rpsK PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV H+Q++FNNTIVT++D+RG VISW+SA P+AAQTAA +A R +QGM++ EVM+ GPG GR+ A+R Sbjct: 20 GVAHIQSTFNNTIVTISDIRGDVISWASAGSSGFKGAKKGTPYAAQTAADSAARRAMEQGMRQLEVMVSGPGAGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_SYNPX (30S ribosomal protein S11 OS=Synechococcus sp. (strain WH8102) GN=rpsK PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV H+Q++FNNTIV++TD G VISWSSA PFAAQTAA A R DQGM++ EV++KGPG GR+ A+R Sbjct: 20 GVAHIQSTFNNTIVSITDTSGEVISWSSAGASGFKGARKGTPFAAQTAAEAAARRALDQGMRQIEVLVKGPGSGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_DESOH (30S ribosomal protein S11 OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=rpsK PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.051e-17 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV+H+Q++FNNTIVTVTDV G VISWSSA PFAAQ A+ +A++ QG+Q EV +KGPG GR++ALR Sbjct: 18 GVVHIQSTFNNTIVTVTDVAGNVISWSSAGGRGFKGSRKSTPFAAQMASEDAVKKAMAQGLQTVEVYVKGPGPGRESALR 97
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RS11_PROM2 (30S ribosomal protein S11 OS=Prochlorococcus marinus (strain MIT 9215) GN=rpsK PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.372e-17 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GV+H+Q++FNNTIV+++D G VISWSSA PFAAQTAA A R DQGM++ EV+++GPG GR+ A+R Sbjct: 20 GVVHIQSTFNNTIVSISDTSGHVISWSSAGASGFKGARKGTPFAAQTAAEAAARRALDQGMRQIEVLVRGPGAGRETAIR 99 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |