CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_BARVE (30S ribosomal protein S11, chloroplastic OS=Barbarea verna GN=rps11 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEV IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ARATH (30S ribosomal protein S11, chloroplastic OS=Arabidopsis thaliana GN=rps11 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEV IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ACOCL (30S ribosomal protein S11, chloroplastic OS=Acorus calamus GN=rps11 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 65/81 (80.25%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGIIHVQASFNNTIVTVTDVRGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_LACSA (30S ribosomal protein S11, chloroplastic OS=Lactuca sativa GN=rps11 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.013e-28 Identity = 65/81 (80.25%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTDVRGRV+SWSSA PFAAQTAAG+AIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 25 KGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTSGFRGTKRGTPFAAQTAAGHAIRAVVDQGMQRAEVMIKGPGLGRDAALR 105
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ARAHI (30S ribosomal protein S11, chloroplastic OS=Arabis hirsuta GN=rps11 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.013e-28 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQGMQRAEV IKGPGLGRDAALR Sbjct: 27 KGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_HELAN (30S ribosomal protein S11, chloroplastic OS=Helianthus annuus GN=rps11 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28 Identity = 65/81 (80.25%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 25 KGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFQGTRRGTPFAAQTAAANAIRAVVDQGMQRAEVMIKGPGLGRDAALR 105
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_GUIAB (30S ribosomal protein S11, chloroplastic OS=Guizotia abyssinica GN=rps11 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28 Identity = 65/81 (80.25%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 25 KGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFRGTRRGTPFAAQTAAANAIRAVVDQGMQRAEVMIKGPGLGRDAALR 105
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_AETGR (30S ribosomal protein S11, chloroplastic OS=Aethionema grandiflora GN=rps11 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQG+QRAEV IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGIQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_AETCO (30S ribosomal protein S11, chloroplastic OS=Aethionema cordifolium GN=rps11 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28 Identity = 66/81 (81.48%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAIRAV DQG+QRAEV IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGIQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_TOBAC (30S ribosomal protein S11, chloroplastic OS=Nicotiana tabacum GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |