CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SOLTU (30S ribosomal protein S11, chloroplastic OS=Solanum tuberosum GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SOLLC (30S ribosomal protein S11, chloroplastic OS=Solanum lycopersicum GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SOLBU (30S ribosomal protein S11, chloroplastic OS=Solanum bulbocastanum GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_NICSY (30S ribosomal protein S11, chloroplastic OS=Nicotiana sylvestris GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ATRBE (30S ribosomal protein S11, chloroplastic OS=Atropa belladonna GN=rps11 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 65/81 (80.25%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SPIOL (30S ribosomal protein S11, chloroplastic OS=Spinacia oleracea GN=rps11 PE=1 SV=4) HSP 1 Score: 125.561 bits (314), Expect = 3.849e-28 Identity = 64/81 (79.01%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SW+SA PFAAQTAAGNAIR V +QGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_NICTO (30S ribosomal protein S11, chloroplastic OS=Nicotiana tomentosiformis GN=rps11 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 64/81 (79.01%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQTA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAVANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CERDE (30S ribosomal protein S11, chloroplastic OS=Ceratophyllum demersum GN=rps11 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 64/81 (79.01%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRG+V+SWSSA PFAAQTAA NAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGQVVSWSSAGTCGFRGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_NYMAL (30S ribosomal protein S11, chloroplastic OS=Nymphaea alba GN=rps11 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.120e-27 Identity = 64/80 (80.00%), Postives = 66/80 (82.50%), Query Frame = 2 Query: 647 GVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 GVIHVQASFNNTIVTVTD +GRV+SWSSA PFAAQTAAGNAIRAV DQGMQRAEVMIKGPGLGRDAALR Sbjct: 28 GVIHVQASFNNTIVTVTDPQGRVVSWSSAGTCGFKGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_LIRTU (30S ribosomal protein S11, chloroplastic OS=Liriodendron tulipifera GN=rps11 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.120e-27 Identity = 64/81 (79.01%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDV G+V+SWSSA PFAAQTAAGNAIR V DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVLGQVVSWSSAGTCGFRGTRRGTPFAAQTAAGNAIRTVVDQGMQRAEVMIKGPGLGRDAALR 107 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |