CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_OENAR (30S ribosomal protein S11, chloroplastic OS=Oenothera argillicola GN=rps11 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27 Identity = 64/81 (79.01%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASF+NTIVTVTDVRGRVISWSSA PFAAQTAAG+AIR V DQGMQRAEV IKGPGLGRDAALR Sbjct: 33 KGVIHVQASFHNTIVTVTDVRGRVISWSSAGTCGFKSTRKGTPFAAQTAAGDAIRPVVDQGMQRAEVRIKGPGLGRDAALR 113
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PEA (30S ribosomal protein S11, chloroplastic OS=Pisum sativum GN=rps11 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 62/81 (76.54%), Postives = 66/81 (81.48%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVI++QASFNNTIVTVTDVRGRVISWSSA PFAAQTAAGNAI+ V +QGMQRAEV IKGPGLGRDAALR Sbjct: 27 KGVIYIQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAGNAIQTVVEQGMQRAEVRIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_IPOPU (30S ribosomal protein S11, chloroplastic OS=Ipomoea purpurea GN=rps11 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 62/81 (76.54%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SWSSA PFAA+TAA NAIR V D+GM RAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAETAASNAIRTVVDRGMLRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_LEMMI (30S ribosomal protein S11, chloroplastic OS=Lemna minor GN=rps11 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 62/81 (76.54%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IHVQASFNNTIVTVTDVRGRV+SWSSA PFAAQ+AA NAIR V DQGMQRAEVMIKGPG GRDAALR Sbjct: 27 KGIIHVQASFNNTIVTVTDVRGRVVSWSSAGTSGFKGAKRGTPFAAQSAAVNAIRTVVDQGMQRAEVMIKGPGPGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PHAAO (30S ribosomal protein S11, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rps11 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 61/81 (75.31%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRGRV+SW+SA P+AAQ AA NAIR + DQGMQRAEVMIKGPGLGRDAALR Sbjct: 27 KGVIHVQASFNNTIVTVTDVRGRVVSWASAGTSGFRGTRKGTPYAAQAAAFNAIRTLVDQGMQRAEVMIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CUSRE (Plastid 30S ribosomal protein S11 OS=Cuscuta reflexa GN=rps11 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 62/81 (76.54%), Postives = 65/81 (80.25%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASF+NTIVTVTDVRGRV+SWSSA PFAAQTAA NAIR V DQGM RAEV+IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFHNTIVTVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAATNAIRTVVDQGMLRAEVLIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CUSEX (Plastid 30S ribosomal protein S11 OS=Cuscuta exaltata GN=rps11 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.203e-25 Identity = 60/81 (74.07%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASF+NTIV VTDVRGRV+SWSSA PFAAQTAA AIR V DQGM RAEV+IKGPGLGRDAALR Sbjct: 27 KGVIHVQASFHNTIVAVTDVRGRVVSWSSAGTSGFKGTRRGTPFAAQTAATKAIRTVVDQGMLRAEVLIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CYCTA (30S ribosomal protein S11, chloroplastic OS=Cycas taitungensis GN=rps11 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.795e-25 Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTIVTVTDVRG+V+SWSSA PFAAQTAA NAIR + DQGM+RAEVMI GPG GRD ALR Sbjct: 19 KGVIHVQASFNNTIVTVTDVRGQVVSWSSAGACGFKGTKRSTPFAAQTAAENAIRTLMDQGMERAEVMISGPGPGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_MARPO (30S ribosomal protein S11, chloroplastic OS=Marchantia polymorpha GN=rps11 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.752e-24 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTD+RG+V+SWSSA PFAAQTAA NAIR + DQGM++AEVMI GPG GRD ALR Sbjct: 19 KGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGTKKSTPFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ANGEV (30S ribosomal protein S11, chloroplastic OS=Angiopteris evecta GN=rps11 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 55/81 (67.90%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTD+RG+V+SWSSA PFAAQTAA NAIR + DQGM++AEVMI GPG GR+ ALR Sbjct: 19 KGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACGFKGTRKSTPFAAQTAAENAIRTLIDQGMKQAEVMISGPGPGRETALR 99 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |