CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CUSGR (Plastid 30S ribosomal protein S11 OS=Cuscuta gronovii GN=rps11 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.156e-22 Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 +GVIH+QAS NTIVTVTDVRGRV+SW+SA PFAAQTAA NAIR + GM+ A+V+IKGPGLGRDAALR Sbjct: 27 QGVIHIQASLQNTIVTVTDVRGRVVSWASAGSAGFKGTTRRTPFAAQTAATNAIRTAINHGMREADVLIKGPGLGRDAALR 107
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ADICA (30S ribosomal protein S11, chloroplastic OS=Adiantum capillus-veneris GN=rps11 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22 Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTI+TVTDVRG+VI WSSA PFAAQ AA NAI+A D+GM++AEVM+ GPG GRD ALR Sbjct: 19 KGVIHIQASFNNTIITVTDVRGQVIIWSSAGACGFKGTRKSTPFAAQAAAENAIKASVDRGMKQAEVMMSGPGPGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_EPIVI (Plastid 30S ribosomal protein S11 OS=Epifagus virginiana GN=rps11 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.032e-22 Identity = 56/81 (69.14%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQ SFNNTIV VTD++GRV+SWSSA FAAQ AA NAIR V QGMQRAEVMIKGPG+GRDA LR Sbjct: 27 KGVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTRRGTSFAAQIAATNAIRIV--QGMQRAEVMIKGPGIGRDAVLR 105
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PINKO (30S ribosomal protein S11, chloroplastic OS=Pinus koraiensis GN=rps11 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21 Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVI+VQASFNNTIVT TDVRG+VISWSSA PFAAQTAA N IR + D+G+ R EVMI GPG GRD ALR Sbjct: 19 KGVIYVQASFNNTIVTATDVRGQVISWSSAGACGFKGTRRGTPFAAQTAAENVIRTLMDRGIGRVEVMISGPGRGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_MARQU (30S ribosomal protein S11, chloroplastic OS=Marsilea quadrifolia GN=rps11 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IH+QA FNNTI+TVTDVRG+VI WSSA PFAAQ AA NA+RA D+G+++AEVMI GPG GRD ALR Sbjct: 19 KGIIHIQAGFNNTIITVTDVRGQVILWSSAGACGFKGTRRSTPFAAQAAAENAVRASMDRGLKQAEVMISGPGPGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_HUPLU (30S ribosomal protein S11, chloroplastic OS=Huperzia lucidula GN=rps11 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21 Identity = 53/82 (64.63%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQ-GMQRAEVMIKGPGLGRDAALR 886 KGVIH+QASFNNTIVTVTDVRG+ +SWSSA PFAAQTAA NAIR + DQ GM++AE+++KGPG GRD A R Sbjct: 20 KGVIHIQASFNNTIVTVTDVRGQAVSWSSAGACGSRGTKKSTPFAAQTAAENAIRMLIDQGGMEQAEIIMKGPGPGRDTASR 101
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_CHLAT (30S ribosomal protein S11, chloroplastic OS=Chlorokybus atmophyticus GN=rps11 PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGV+HVQA+FNNTIVT+TD++G VISWSSA PFAAQTAA NA+R +QGM+ AE+ + GPG GR+ A+R Sbjct: 19 KGVVHVQATFNNTIVTITDIKGEVISWSSAGSCGFKGTKKGTPFAAQTAAENAVRQAIEQGMKEAEITVSGPGSGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SPIMX (30S ribosomal protein S11, chloroplastic OS=Spirogyra maxima GN=rps11 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20 Identity = 53/81 (65.43%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 K +IHVQASFNNTIVTVTDV+G+VIS SA PFAAQTAA NAIR + DQG+++AEVMI GPG GRD ALR Sbjct: 19 KAIIHVQASFNNTIVTVTDVQGQVISSCSAGACGFKGAKKNTPFAAQTAAENAIRLLIDQGLKQAEVMISGPGRGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PELHO (30S ribosomal protein S11, chloroplastic OS=Pelargonium hortorum GN=rps11 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.501e-19 Identity = 51/81 (62.96%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+IHVQASF+NTIVTVTDV GRV++ +SA PFAAQT A NAIR V QGM RA V++KG G GRDAALR Sbjct: 29 KGIIHVQASFSNTIVTVTDVGGRVVTSASAGACGFKGRRRGTPFAAQTTAENAIRTVVTQGMHRAVVLVKGVGRGRDAALR 109
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_JASNU (30S ribosomal protein S11, chloroplastic OS=Jasminum nudiflorum GN=rps11 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.501e-19 Identity = 48/81 (59.26%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 +GVIH+Q SF+NTIVTVTD RG+V+SWSSA PFAAQ A +AI V DQG+QRA++ +KG G GRDAALR Sbjct: 35 RGVIHIQTSFHNTIVTVTDGRGQVVSWSSAGTCRFKGPRKRTPFAAQIVAADAIGPVVDQGLQRAKIKLKGTGRGRDAALR 115 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |