CX069718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_NEPOL (30S ribosomal protein S11, chloroplastic OS=Nephroselmis olivacea GN=rps11 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.266e-19 Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGV+H+QASFNNTIVT+TD G V++WSSA PFAAQTAA AIR DQGM++A+++++GPG GR+ A+R Sbjct: 19 KGVVHIQASFNNTIVTITDSSGGVLAWSSAGACGFRGAKKGTPFAAQTAAETAIRQCIDQGMRQADIIVQGPGNGRETAIR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PSINU (30S ribosomal protein S11, chloroplastic OS=Psilotum nudum GN=rps11 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 48/81 (59.26%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KG+I ++ASFNNTIVTVT+ +G+VI+WSSA PFAAQ A NAIR + QGM++AEVMI GPG GRD ALR Sbjct: 19 KGIIQIKASFNNTIVTVTNSQGQVITWSSAGACGFKGTKRSTPFAAQIATENAIRTLISQGMKQAEVMISGPGPGRDTALR 99
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_WHEAT (30S ribosomal protein S11, chloroplastic OS=Triticum aestivum GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SORBI (30S ribosomal protein S11, chloroplastic OS=Sorghum bicolor GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SACOF (30S ribosomal protein S11, chloroplastic OS=Saccharum officinarum GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_SACHY (30S ribosomal protein S11, chloroplastic OS=Saccharum hybrid GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_PENAM (30S ribosomal protein S11, chloroplastic OS=Pennisetum americanum GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ORYSJ (30S ribosomal protein S11, chloroplastic OS=Oryza sativa subsp. japonica GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ORYSI (30S ribosomal protein S11, chloroplastic OS=Oryza sativa subsp. indica GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112
BLAST of CX069718 vs. ExPASy Swiss-Prot
Match: RR11_ORYSA (30S ribosomal protein S11, chloroplastic OS=Oryza sativa GN=rps11 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 644 KGVIHVQASFNNTIVTVTDVRGRVISWSSAXXXXXXXXXXXXPFAAQTAAGNAIRAVADQGMQRAEVMIKGPGLGRDAALR 886 KGVIHVQASFNNTI+TVTD +GRV+ WSSA P+A Q A +AIR V G+QRAEVM+KG G GRDAALR Sbjct: 35 KGVIHVQASFNNTIITVTDPQGRVVFWSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALR 112 The following BLAST results are available for this feature:
BLAST of CX069718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069718 ID=CX069718; Name=CX069718; organism=Citrus sinensis; type=EST; length=887bpback to top |