CX069712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B10_ORYSI (Histone H2B.10 OS=Oryza sativa subsp. indica GN=H2B.10 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.470e-19 Identity = 45/50 (90.00%), Postives = 50/50 (100.00%), Query Frame = -2 Query: 238 GEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 387 GE+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 104 GESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.756e-19 Identity = 45/49 (91.84%), Postives = 49/49 (100.00%), Query Frame = -2 Query: 238 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 107 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 155
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.756e-19 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = -2 Query: 241 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 384 E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 91 ESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.756e-19 Identity = 45/49 (91.84%), Postives = 49/49 (100.00%), Query Frame = -2 Query: 238 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 109 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 157
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.274e-18 Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = -2 Query: 241 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 105 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.274e-18 Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = -2 Query: 241 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 105 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B2_SOLLC (Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.274e-18 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -2 Query: 238 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 384 E+SRLAR NKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 92 ESSRLARINKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.274e-18 Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = -2 Query: 241 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 108 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 155
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.274e-18 Identity = 45/48 (93.75%), Postives = 48/48 (100.00%), Query Frame = -2 Query: 241 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 384 EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 105 EASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CX069712 vs. ExPASy Swiss-Prot
Match: H2B9_ORYSJ (Histone H2B.9 OS=Oryza sativa subsp. japonica GN=H2B.9 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.664e-18 Identity = 45/49 (91.84%), Postives = 49/49 (100.00%), Query Frame = -2 Query: 238 EASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 384 EA++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 104 EAAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 152 The following BLAST results are available for this feature:
BLAST of CX069712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069712 ID=CX069712; Name=CX069712; organism=Citrus sinensis; type=EST; length=388bpback to top |