CX069706

Overview
NameCX069706
Unique NameCX069706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.128e-41
Identity = 79/132 (59.85%), Postives = 93/132 (70.45%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYH-IIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQ TGTSI  C I AS+DL    +   TYLGRPWK+YSRTV M++++  LINPAGW +W GDFAL TLYY E+ N GPG+ T+ RV WPGYH I D  EA  FTV+  + G +WL  TGV Y  G
Sbjct:  416 AQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDG 547          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.088e-40
Identity = 76/132 (57.58%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYH-IIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR+DPNQNTG SIHNC I  S          +TYLGRPWK+YSRTV MQ+F+D  I+P+GW  WS +FAL TLYY E+ N+GPGS  + RV+W GYH  +  TEA  FTVS F+ G++WLP TGV ++ G
Sbjct:  405 AQGRSDPNQNTGISIHNCRITGST---------KTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSG 527          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.615e-39
Identity = 76/132 (57.58%), Postives = 93/132 (70.45%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQ TGTSI  C I AS DL    +   TYLGRPWK+YSRTV M++++  LI+P+GW +W GDFAL TLYY E+ N GPG+ T+ RV WPGYH+I D  EA +FTV+  + G +WL  T V Y  G
Sbjct:  416 AQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDG 547          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.460e-39
Identity = 76/132 (57.58%), Postives = 92/132 (69.70%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQ TGTSI  C I AS DL       +TYLGRPWK++SRTV MQ+++D  I+P+GW +W GDFAL TLYY E+ N GPG+ T+ RV WPGYH+I D  EA  FTV+  + G +WL  T V Y  G
Sbjct:  410 AQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEG 541          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 7.607e-39
Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = -2
Query:  455 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPY 838
            AQGR D NQNT  SI  C I AS+DLA    +V+T+LGRPWK YSRTV MQ+F+D+ I+PAGW  W G+FALSTLYY EY NTGPG+DT+ RV W G+ +I D+ EA  FTV+  + G  WL  TGV +
Sbjct:  425 AQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.695e-38
Identity = 68/131 (51.91%), Postives = 93/131 (70.99%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R   +++TG S+ NC+I AS DL + S  V++YLGRPW+E+SRTV M++++D  I+ +GW  W+G  AL TLYY EYNN GPGS+T  RV WPG+HI+   +A NFT + F++GD WL  T  PY+ G
Sbjct:  416 AQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIMGYEDAFNFTATEFITGDGWLGSTSFPYDNG 546          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.213e-38
Identity = 70/132 (53.03%), Postives = 97/132 (73.48%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAAN-FTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR DP+ N+G SI +  IRA+ +  +     ++YLGRPWK+YSRTV+++T +D LI+P GW +WSG +ALSTLYY E+ NTG G+ T  RV WPG+H++   E A+ FTVS F+ GD+W+P TGVP++ G
Sbjct:  387 AQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAG 518          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.891e-38
Identity = 72/132 (54.55%), Postives = 89/132 (67.42%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIID-ATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR DPN+ TG +I    I A  DL     T  TYLGRPWK YSRTV+MQ +M   INP GW +W+G+FAL TLYY EY N+GPG+    RV WPGYH+++ + EA NFTVS  + G+ WLP TG+ +  G
Sbjct:  393 AQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAG 524          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.931e-38
Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTG  I  C I A++DL    ++  TYLGRPWKEYSRTV MQ+ +  +I PAGWH+W+G+FAL TL+Y EY NTG G+ T+ RV W G+ +I  +TEA  +T   F++G +WL  TG P++ G
Sbjct:  451 AQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLG 582          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.440e-38
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDAT-EAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R DPNQNTG SIH C + A+ DL +   +  TYLGRPWK YSR VYM + M   I+P GW +W+G FAL +LYY EY N G GS    RV WPGYH+I +T EA+ FTV+ F+SG +WLP TGV +  G
Sbjct:  453 AQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSG 584          
The following BLAST results are available for this feature:
BLAST of CX069706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME22_SOLLC8.128e-4159.85Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME35_ARATH3.088e-4057.58Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME21_SOLLC2.615e-3957.58Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME3_SOLLC4.460e-3957.58Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME18_ARATH7.607e-3958.91Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME12_ARATH1.695e-3851.91Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME36_ARATH2.213e-3853.03Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME32_ARATH2.891e-3854.55Probable pectinesterase/pectinesterase inhibitor 3... [more]
PMEU1_SOLLC4.931e-3854.55Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME61_ARATH6.440e-3856.06Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C09-F18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069706 ID=CX069706; Name=CX069706; organism=Citrus sinensis; type=EST; length=839bp
CTCGAGAGCCAAAAATTTCTTCTTCAAATGGGCTATTTGCGCATATGTGT
TAACAATAAAACGTTAACAGAATTAGGATTAATTGTTGACAAACTTTAAT
ATTTGTTACCAGAATGATAGAGTTGTGCAAAATTTAGGAAATAAGTAGCA
TAATAAAAAGCAGTAGGGACGATTCACTGTTGCGGATATTTCATCATCAA
TTTCGATAACAACATTATTTAAACATCTTAGTCATTGGAGTACTTCTACT
GCAAAAAAGTTAAAAATAAAAAAAATACAATAGCAGTTCAAATATTAAAT
TTATTGTCAATACAATTGTACATTTGAATAGCTTGTGTATCACACATGAT
TATTGAGTTTGCAAAGCAATTTCCCAAAAAAAAAAAACCGACGAACAGGA
AGCTTCACAAGATGAGTAGCTTAATTAAAAAAATTAACTAATGAAACCAC
CGTTGTAAGGCACTCCAGTTTGCGGTAACCAATTGTCCCCAGACAAGAAA
TTAGAAACGGTGAAATTAGCGGCTTCTGTGGCATCGATGATATGGTAACC
CGGCCAAGTCACCCTATTGGTGGTGTCTGACCCTGGGCCGGTATTATTGT
ACTCGGCATAATACAATGTAGATAGTGCAAAATCGCCGCTCCAATCGTGC
CAACCAGCAGGGTTTATCAAACTATCCATGAAAGTTTGCATGTAAACAGT
TCTAGAGTACTCCTTCCATGGCCTCCCCAGATATGTCTGCACCGTTTGAC
TGCCCGACGCCAGATCATTGGATGCTCTAATTGTGCAATTATGGATGGAC
GTGCCGGTATTCTGGTTAGGATCGGTCCTACCTTGTGCT
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