CX069706

Overview
NameCX069706
Unique NameCX069706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.435e-37
Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = -2
Query:  452 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHI-IDATEAANFTVSNFLSGDNWLPQTGVPYN 838
            AQGR DPNQNTG SIHNCTI+  ++L      +QT+LGRPWK++S TV M++FMD  INP GW  W+GD A  T++YAEY N+GPG+ T NRV W G    +   EA  FTV  F+ G+NWLP T VP+N
Sbjct:  436 AQGRKDPNQNTGISIHNCTIKPLDNLTD----IQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.447e-37
Identity = 73/130 (56.15%), Postives = 87/130 (66.92%), Query Frame = -2
Query:  452 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDA-TEAANFTVSNFLSGDNWLPQTGVPYN 838
            AQGR+DPNQNTG  I NC I  ++DL +   T  TYLGRPWKEYSRTV MQ+ +  +I P GWH+WSG FAL TL Y EY N G G+ T NRV W GY +I + TEA  FT   F+ G  WL  TG P++
Sbjct:  455 AQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFS 584          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.196e-37
Identity = 71/130 (54.62%), Postives = 94/130 (72.31%), Query Frame = -2
Query:  455 AQGRTDPNQNTGTSIHNCTIRASNDLASGS-QTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPY 838
            AQGR DPN+ TG SI  C I A +DL + S  +  TYLGRPWK YSRTV MQ+F+ ++I P GW +W+GDFAL++L+Y EY N GPG+   +RV WPGY +  ++T+A N+TV+ F+ G+ WLP TGV Y
Sbjct:  387 AQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKY 516          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.196e-37
Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTG  I    I A++DL     +  TYLGRPWKEYSRTV MQ+ +  LI+PAGWH+W G+FAL+TL+Y E+ N+G G+ T+ RV W G+ +I  ATEA  FT  +F++G +WL  TG P++ G
Sbjct:  452 AQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 583          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.174e-37
Identity = 73/132 (55.30%), Postives = 92/132 (69.70%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTG  I    I A++DL     +  TYLGRPWKEYSRTV MQ+ + ++INPAGW  W G+FAL TLYY EY NTG G+ T+ RVTW G+ +I  +TEA  FT  +F++G +WL  T  P++ G
Sbjct:  187 AQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLG 318          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.299e-37
Identity = 72/131 (54.96%), Postives = 85/131 (64.89%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR  PNQNTG  I N  + A         T  TYLGRPWK YSRTVYM T+M  L+ P GW +W G+FAL TL+Y EYNN GPG  ++ RV WPGYHI+D   A +FTV +F+ G  WLP TGV +  G
Sbjct:  419 AQGRKSPNQNTGFVIQNSYVLA---------TQPTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALSFTVGSFIDGRRWLPATGVTFTAG 540          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.214e-36
Identity = 70/132 (53.03%), Postives = 93/132 (70.45%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIIDATEAAN-FTVSNFLSGDNWLPQTGVPYNGG 838
            AQ R DPNQNTG SIH   + A++DL + + + QTYLGRPWK +SRTVYM +++   ++  GW +W+  FAL TLYY EY N+GPGS    RV+WPGY +I++T  AN FTV+ F+ G +WLP TGV +  G
Sbjct:  464 AQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAG 595          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.706e-36
Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIID-ATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGRTDPNQNTG  I  C I A++DL S   +  TYLGRPWKEYS+TV MQ+ +  +I P GW +W+G FAL+TL Y EY+NTG G+ T NRV W G+ +I  A EA  +T   F+ G  WL  TG P++ G
Sbjct:  460 AQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLG 591          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.534e-36
Identity = 69/134 (51.49%), Postives = 94/134 (70.15%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDW--SGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHIID-ATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR DP QNTG SIHN  I  + DL     TV+TY+GRPW ++SRTV +QT++D++++P GW  W     F L TL+YAEY NTGP S T  RV+W G+H++  A++A+ FTV  F++G  WLP+TG+P+  G
Sbjct:  402 AQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSG 535          
BLAST of CX069706 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.534e-36
Identity = 70/132 (53.03%), Postives = 92/132 (69.70%), Query Frame = -2
Query:  446 AQGRTDPNQNTGTSIHNCTIRASNDLASGSQTVQTYLGRPWKEYSRTVYMQTFMDSLINPAGWHDWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHII-DATEAANFTVSNFLSGDNWLPQTGVPYNGG 838
            AQGR DPNQNTG  I    I A++DL     +  TYLGRPWKEYSRTV MQ+ +  +I+PAGWH+W G+FAL+TL+Y E+ N G G+ T+ RV W G+ +I  ATEA  FT  +F++G +WL  TG P++ G
Sbjct:  452 AQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 583          
The following BLAST results are available for this feature:
BLAST of CX069706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PME46_ARATH1.435e-3756.15Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME2_ARATH2.447e-3756.15Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME_PRUPE3.196e-3754.62Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME1_CITSI3.196e-3754.55Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME_DAUCA4.174e-3755.30Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME22_ARATH9.299e-3754.96Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME34_ARATH1.214e-3653.03Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_ARATH2.706e-3653.79Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME59_ARATH3.534e-3651.49Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME3_CITSI3.534e-3653.03Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C09-F18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069706 ID=CX069706; Name=CX069706; organism=Citrus sinensis; type=EST; length=839bp
CTCGAGAGCCAAAAATTTCTTCTTCAAATGGGCTATTTGCGCATATGTGT
TAACAATAAAACGTTAACAGAATTAGGATTAATTGTTGACAAACTTTAAT
ATTTGTTACCAGAATGATAGAGTTGTGCAAAATTTAGGAAATAAGTAGCA
TAATAAAAAGCAGTAGGGACGATTCACTGTTGCGGATATTTCATCATCAA
TTTCGATAACAACATTATTTAAACATCTTAGTCATTGGAGTACTTCTACT
GCAAAAAAGTTAAAAATAAAAAAAATACAATAGCAGTTCAAATATTAAAT
TTATTGTCAATACAATTGTACATTTGAATAGCTTGTGTATCACACATGAT
TATTGAGTTTGCAAAGCAATTTCCCAAAAAAAAAAAACCGACGAACAGGA
AGCTTCACAAGATGAGTAGCTTAATTAAAAAAATTAACTAATGAAACCAC
CGTTGTAAGGCACTCCAGTTTGCGGTAACCAATTGTCCCCAGACAAGAAA
TTAGAAACGGTGAAATTAGCGGCTTCTGTGGCATCGATGATATGGTAACC
CGGCCAAGTCACCCTATTGGTGGTGTCTGACCCTGGGCCGGTATTATTGT
ACTCGGCATAATACAATGTAGATAGTGCAAAATCGCCGCTCCAATCGTGC
CAACCAGCAGGGTTTATCAAACTATCCATGAAAGTTTGCATGTAAACAGT
TCTAGAGTACTCCTTCCATGGCCTCCCCAGATATGTCTGCACCGTTTGAC
TGCCCGACGCCAGATCATTGGATGCTCTAATTGTGCAATTATGGATGGAC
GTGCCGGTATTCTGGTTAGGATCGGTCCTACCTTGTGCT
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