DR403991

Overview
NameDR403991
Unique NameDR403991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT2_BOVIN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HINT2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P   L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   84 QAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: PKIA_DICDI (Protein pkiA OS=Dictyostelium discoideum GN=pkiA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.713e-18
Identity = 35/84 (41.67%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  200 RSPSSILIIPKVK-DGLTGLSKAE-ERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P  +L+IPK+   GL+ ++  + E++ E +G ++     +A  +G  D +R+VIN+G  G QSV  +H+H+LGGRQMNWPPG
Sbjct:   45 QAPVHLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKGA-DSYRLVINEGVLGQQSVRWLHIHILGGRQMNWPPG 127          

HSP 2 Score: 42.3578 bits (98), Expect = 6.713e-18
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 3
Query:   72 SENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            SE+   +   P D  TIF KII+  IPSK  Y+D+  +A  DI+PQAP
Sbjct:    2 SESVGNIRIDPRD--TIFAKIISGAIPSKKFYDDEYCIAIEDINPQAP 47          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.553e-17
Identity = 33/79 (41.77%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  200 RSPSSILIIP-KVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 430
            ++ + ILIIP KV   +  +++ +E     LGRL   A  +AK+EG+ EDG+R+++N   +GGQ VFH+H+HL+GG  +
Sbjct:   35 QAKTHILIIPNKVIPTVNDVTEQDE---VALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPL 110          

HSP 2 Score: 49.2914 bits (116), Expect = 2.553e-17
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 3
Query:  117 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQA 212
            TIF KII KEIP+ +VY+D+ V AFRDI PQA
Sbjct:    5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQA 36          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT1_RABIT (Histidine triad nucleotide-binding protein 1 OS=Oryctolagus cuniculus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.947e-17
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+  L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:   47 QAPTHFLVIPKKH--ISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT1_BOVIN (Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.732e-17
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+  L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:   47 QAPTHFLVIPKKY--ISQISAAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT_CAEEL (Histidine triad nucleotide-binding protein 1 OS=Caenorhabditis elegans GN=hint-1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.793e-17
Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P   L+IPK +  +  L  A +    ++G+L+ TA  VAKQ G+ +G+R+V+N+G +G QSVFH+H+H+LGGRQ+ WPPG
Sbjct:   51 QAPIHFLVIPKRRIDM--LENAVDSDAALIGKLMVTASKVAKQLGMANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.495e-17
Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 2
Query:  203 SPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLG 418
            +P  +L+IPKV      L+ A   H  +LG+++     +AK  GL DGF+ +IN G  GGQ VFH+H+H++G
Sbjct:   35 APLHLLLIPKVH--FDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIMG 104          

HSP 2 Score: 41.5874 bits (96), Expect = 9.495e-17
Identity = 18/32 (56.25%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  120 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAP 215
            IF KI  KEIP++ VYED +++ F+DI+P AP
Sbjct:    5 IFCKIAAKEIPAQTVYEDGEMVCFKDINPAAP 36          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT1_RAT (Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus GN=Hint1 PE=1 SV=5)

HSP 1 Score: 86.2705 bits (212), Expect = 1.500e-16
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+  L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:   47 QAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.500e-16
Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+  L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:   47 QAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
BLAST of DR403991 vs. ExPASy Swiss-Prot
Match: HINT1_PONAB (Histidine triad nucleotide-binding protein 1 OS=Pongo abelii GN=HINT1 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16
Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  200 RSPSSILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 445
            ++P+  L+IPK    ++ +S AE+ +  +LG L+   K  A   GL  G+R+V+N+G +GGQSV+H+H+H+LGGRQM+WPPG
Sbjct:   47 QAPTHFLVIPKKH--ISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG 126          
The following BLAST results are available for this feature:
BLAST of DR403991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
HINT2_BOVIN7.193e-1953.66Histidine triad nucleotide-binding protein 2, mito... [more]
PKIA_DICDI6.713e-1841.67Protein pkiA OS=Dictyostelium discoideum GN=pkiA P... [more]
Y961_HAEIN2.553e-1741.77HIT-like protein HI0961 OS=Haemophilus influenzae ... [more]
HINT1_RABIT3.947e-1747.56Histidine triad nucleotide-binding protein 1 OS=Or... [more]
HINT1_BOVIN6.732e-1747.56Histidine triad nucleotide-binding protein 1 OS=Bo... [more]
HINT_CAEEL8.793e-1746.34Histidine triad nucleotide-binding protein 1 OS=Ca... [more]
HITA_NEIGO9.495e-1741.67Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4... [more]
HINT1_RAT1.500e-1647.56Histidine triad nucleotide-binding protein 1 OS=Ra... [more]
HINT1_MOUSE1.500e-1647.56Histidine triad nucleotide-binding protein 1 OS=Mu... [more]
HINT1_PONAB1.959e-1646.34Histidine triad nucleotide-binding protein 1 OS=Po... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403991 ID=DR403991; Name=DR403991; organism=Citrus sinensis; type=EST; length=645bp
GGGGGAATATTTCAAGCACAATCAGCCGACTTGCAGTGCTGACGTCTCAT
TTGTCTGCCGTCGTCATGGCTTCAGAGAACGAGGCTGCTGTTGCAGCCGT
TCCTTCTGATTCGCCTACCATATTTGACAAAATAATTAACAAAGAAATCC
CATCTAAAGTTGTTTATGAGGATGATAAGGTCTTAGCCTTTAGGGACATA
GATCCCCAAGCTCCATTCTAATTATTCCCAAAGTGAAGGATGGCTTGACT
GGACTTTCAAAGGCCGAGGAAAGGCATTGCGAAATTCTTGGCCGCCTTCT
TTACACTGCTAAGCTTGTTGCTAAACAGGAAGGACTAGAAGACGGCTTTA
GGATTGTGATTAATGATGGGCCAAATGGAGGTCAATCAGTTTTTCACATC
CACGTCCACCTCCTAGGAGGACGACAAATGAACTGGCCCCCGGGCTAAGA
TGAAGTATTTTGGGTGCCAGATTCTCTTATGAAAAAATGATTATGCCCTT
TGTACTTTAATATGCATCAAGCTGCATCGAGCTTCAAATAACAAACTAAT
TGGTGGCTGCTTTGAGCCACATTATTTGATATGATGTGAAATGACATTGT
GCTGAAAGGAGAAAAAGACCTTCAATAATAAGGGTGTGGTTTGTC
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