DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:147..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LISMH (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.804e-57
Identity = 117/214 (54.67%), Postives = 145/214 (67.76%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV++GHPDK+ DQISDA+LDA + +DP+++VACET   T +V+V GEITT   VD  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV      R         E IGAGDQG MFG+ATDET E MPL   LA  L  +LTE+RK +   +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDL 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LISMF (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.804e-57
Identity = 117/214 (54.67%), Postives = 145/214 (67.76%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV++GHPDK+ DQISDA+LDA + +DP+++VACET   T +V+V GEITT   VD  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV      R         E IGAGDQG MFG+ATDET E MPL   LA  L  +LTE+RK +   +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDL 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LISMC (S-adenosylmethionine synthetase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.804e-57
Identity = 117/214 (54.67%), Postives = 145/214 (67.76%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV++GHPDK+ DQISDA+LDA + +DP+++VACET   T +V+V GEITT   VD  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV      R         E IGAGDQG MFG+ATDET E MPL   LA  L  +LTE+RK +   +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDL 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LISIN (S-adenosylmethionine synthetase OS=Listeria innocua GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.804e-57
Identity = 117/214 (54.67%), Postives = 145/214 (67.76%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV++GHPDK+ DQISDA+LDA + +DP+++VACET   T +V+V GEITT   VD  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV      R         E IGAGDQG MFG+ATDET E MPL   LA  L  +LTE+RK +   +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDL 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.804e-57
Identity = 115/215 (53.49%), Postives = 149/215 (69.30%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP+++VACET   T +V+V GEI+T A VD +K+VR+T + IG+     G D D+C V+V +++QSPDIAQGV      R +D      IGAGDQG MFG+A D+T E MPL   L+ +L  ++ E+RK+   ++LRPD K QVTVEY  +     P RV TV+ISTQHDE VT + I  D+
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLEQDPQARVACETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKDEDPLDKIGAGDQGLMFGFAVDQTPELMPLPIALSHRLMRKVAELRKSGQLAYLRPDAKAQVTVEYDENE---QPKRVDTVVISTQHDEDVTLETIQKDM 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.969e-57
Identity = 115/212 (54.25%), Postives = 142/212 (66.98%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP  +VACET   T +V V GEI+T   VD  KIVR T R IG+     G D D C V+ +I++QS DIA GV      +       + +GAGDQG MFGYAT+ET EFMP+   LA +L  RL EVRK+ T  +LRPDGKTQVT+EY +D     PVRV  ++ISTQH   + +++I  DL
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEMDKIDAVGAGDQGMMFGYATNETKEFMPMPIALAHRLSRRLAEVRKDGTLDYLRPDGKTQVTIEYEDDK----PVRVDAIVISTQHGPEIGHEQIEKDL 211          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BACCN (S-adenosylmethionine synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metK PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.969e-57
Identity = 121/215 (56.28%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+CDQISD++LDA L +D  ++VACET   T +V+V GEITT   VD  KIVR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK+ T  +LRPDGKTQVTVE Y++NG   PVRV T++ISTQH   +T ++I  DLK
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDAILSKDANARVACETTVTTGLVLVAGEITTSTYVDIPKIVRETIQGIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDRALEAREGQMTDAEIEAIGAGDQGLMFGFACNETKELMPLPISLAHKLARRLTEVRKDETLEYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPEITWEQIDRDLK 218          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEP3 (S-adenosylmethionine synthetase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=metK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.475e-57
Identity = 117/214 (54.67%), Postives = 144/214 (67.29%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFT-KRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV EGHPDK+CDQISDA+LD  L++DP ++VACET   T +V+V GEITT+  VD  K+VR     IG+     G DAD C V+ +I++QSPDIA GV        G  +    E IGAGDQG MFG+A DET E MP+  +LA KL  RL EVRKN T S+LRPDGKTQVTVEY +D     PVRV +V++S QH   + +D I  D+
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDEILKKDPYARVACETAVTTGLVLVMGEITTQCYVDIPKVVRKVVEEIGYTRAKFGFDADTCAVITSIDEQSPDIALGVDKALEAKRGELSDSEIEAIGAGDQGLMFGFACDETEELMPMPIMLAHKLARRLAEVRKNGTLSYLRPDGKTQVTVEYEDDK----PVRVDSVVVSAQHAPEIDHDTIERDI 213          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.475e-57
Identity = 118/214 (55.14%), Postives = 148/214 (69.16%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR----PEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            E  LFTSESV+EGHPDK+ DQ+SDA+LDA LE+DP ++VACET   T +V+VFGEI+T A VD +KIVR T + IG+     G D +   VLV I++QSPDIAQGV      R     +DIGAGDQG MFG+A DET E MPL   L+ +L  RL E+RK     +LRPD K+QVTVE Y+D G   P RV T++ISTQHD+  T ++I  D+K
Sbjct:    3 ERHLFTSESVSEGHPDKVADQVSDAILDAILEKDPMARVACETSVTTGLVLVFGEISTTAYVDIQKIVRQTVKDIGYTRAKYGFDGETVAVLVAIDEQSPDIAQGVDAALEVRDQDEKDDIGAGDQGLMFGFAVDETPELMPLPIALSHRLVRRLAELRKEKVLPYLRPDAKSQVTVE-YDDQGQ--PQRVDTIVISTQHDDETTLEQIEKDIK 213          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.466e-56
Identity = 117/206 (56.80%), Postives = 143/206 (69.42%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MVMV GE+TT A VD E++ R+T R IG+   D+G DAD C VL  I +QSPDI QGV      RPED GAGDQG MFGYA+DET   MP     A +L  R  E+RK+    WLRPD K+QVT   Y DN   VPV +  V++STQH ++VT +++
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQGAGDQGLMFGYASDETDVLMPAPVTYAHRLVKRQAEIRKSGQLDWLRPDAKSQVTF-VYEDN---VPVGIDAVVLSTQHCDSVTTEQL 199          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LISMH3.804e-5754.67S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMF3.804e-5754.67S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISMC3.804e-5754.67S-adenosylmethionine synthetase OS=Listeria monocy... [more]
METK_LISIN3.804e-5754.67S-adenosylmethionine synthetase OS=Listeria innocu... [more]
METK_LACSS3.804e-5753.49S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_CLOAB4.969e-5754.25S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_BACCN4.969e-5756.28S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_THEP38.475e-5754.67S-adenosylmethionine synthetase OS=Thermoanaerobac... [more]
METK_ENTFA8.475e-5755.14S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_PSEA62.466e-5656.80S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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