DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LACF3 (S-adenosylmethionine synthetase OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=metK PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.175e-56
Identity = 113/216 (52.31%), Postives = 149/216 (68.98%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            E  LFTSESV+EGHPDK+ DQISDA+LDA LE+DP+++VA ET   T + +VFGEI+T A VD + +VR+T + IG+     G D D+C V+V +++QS DIAQGV      R       + IGAGDQG MFG+ATDET E+MPL  +L+ KL  R+  +RK+    +LRPD K +VTVEY  D     PVRV TV++STQHD  V+ ++I AD+K
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDALLEKDPDARVAVETSVTTGLALVFGEISTSAYVDIQHVVRETIKEIGYTDGKYGFDGDNCAVIVALDEQSKDIAQGVDDSLEIREGQVDPLDQIGAGDQGLMFGFATDETPEYMPLPLILSHKLMRRIAILRKDKVIKYLRPDAKAEVTVEYDADG---KPVRVDTVVLSTQHDPDVSLEQIQADVK 215          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.175e-56
Identity = 115/215 (53.49%), Postives = 144/215 (66.98%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K VR+T + IG+     G DA+ C VL +I++QSPDIA GV      R         E IGAGDQG MFG+A +ET E MPL   LA KL  RLTEVRK     +LRPDGKTQVTVEY  +N    P+R+ T++ISTQH   ++ ++I  +LK
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSPDIAMGVDQALEAREGAMSDAEIEAIGAGDQGLMFGFACNETKELMPLPISLAHKLSRRLTEVRKEEILPYLRPDGKTQVTVEYDENN---KPIRIDTIVISTQHHPEISLEQIQRNLK 218          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56
Identity = 115/216 (53.24%), Postives = 151/216 (69.91%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISD++LD  L+ DP+++VACET   T +V+V GEI+T A +D +K+VR T + IG+V  + G D ++C V+V I++QSPDIAQGV        GH   R   IGAGDQG MFGYAT+ET E MPL  +L+  L  R+ ++RK    S+LRPD K +VTVE Y+DN    PVRV TV++STQHD  VT ++I  D+
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETREGH-EDRLNQIGAGDQGLMFGYATNETEELMPLPIMLSHHLMQRIAKLRKEQVISYLRPDAKAEVTVE-YDDNDH--PVRVDTVVLSTQHDPDVTLEQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56
Identity = 120/213 (56.34%), Postives = 139/213 (65.26%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITTK  VD  KIVR T   IG+     G D+D C VL  I +QS DIA GV        G      E IGAGDQG MFG+A +ET E MPL   LA KL  RL++VRK+ T  +LRPDGKTQVTVEY  D     PVRV T++ISTQH   V    I  D+
Sbjct:    5 LFTSESVTEGHPDKMCDQISDAILDAILEKDPAARVACETSVSTGLVLVAGEITTKCYVDIPKIVRKTIEEIGYTRAKYGFDSDTCAVLTAINEQSADIALGVDEALESKKGEHRDELEAIGAGDQGIMFGFACNETPELMPLPISLAHKLAKRLSDVRKDGTIGYLRPDGKTQVTVEYDGDK----PVRVDTIVISTQHGPEVDAATIEKDM 213          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.224e-55
Identity = 118/211 (55.92%), Postives = 143/211 (67.77%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP---------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP+S+VA ET   T + +V GE+TT+A VD + IVR T   IG+     G D + C VL +I  QSPDIA GV      +          E +GAGDQG MFGYAT+ET E+MPL  +L+ KL  +L+EVRKN T  +LRPDGKTQVT+EY  ++    PVRV TVLISTQH+  VT  EI
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGELIAEDELEQVGAGDQGMMFGYATNETKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIEYDEND---KPVRVDTVLISTQHEPDVTISEI 211          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.224e-55
Identity = 116/206 (56.31%), Postives = 142/206 (68.93%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN T  WLRPD K+Q+T +Y N+N     V +  V++STQH E ++  ++
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDNNN----IVGIDAVVLSTQHAEDISQKDL 199          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.224e-55
Identity = 117/206 (56.80%), Postives = 141/206 (68.45%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN    WLRPD K+QVT +Y ND      V V  V++STQH E ++  ++
Sbjct:    1 MTTYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGVLPWLRPDAKSQVTFQYNNDK----IVGVDAVVLSTQHAENISQKDL 199          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LACS1 (S-adenosylmethionine synthetase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=metK PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.088e-55
Identity = 111/215 (51.63%), Postives = 149/215 (69.30%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISD++LDA LEQDPE++VA ET   T +V+V GE++T A +D +K+VR+T + IG+ +   G D D+C V+  I++QSPDIA GV      +  D      IGAGDQG MFGYA +ET E MPL   L+  L  ++ EVRKN T ++L PD K QVTVEY ++N    P+R+ TV++STQHDE ++ D+I  D+
Sbjct:    3 EKHLFTSESVSEGHPDKIADQISDSILDAMLEQDPEARVAVETTVTTGLVVVVGEVSTTAHIDIQKVVRETIKEIGYKNGKYGFDGDNCAVITAIDEQSPDIALGVDNSLEVKNGDVDPLDQIGAGDQGMMFGYAINETPELMPLPISLSHHLMKKVAEVRKNGTLAYLGPDAKAQVTVEYDDNN---QPLRIDTVVLSTQHDENISLDQIRKDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.726e-55
Identity = 114/213 (53.52%), Postives = 139/213 (65.26%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQG------VHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            +LFTSESV EGHPDK+ DQISDAVLDA L  DP ++VACET   T +V+V GEITT A VD   +VRD  R IG+     G D   C V+  I+ QSPDIAQG      V G   ++  +IGAGDQG MFG+A DET E MPL   LA +L  RL +VRKN T  +LRPDGKTQVT+EY +      P R+ T++IS QHD   T ++I  D+
Sbjct:    8 YLFTSESVTEGHPDKMADQISDAVLDAILALDPRARVACETLLTTGLVVVTGEITTHAYVDIPNLVRDVVRDIGYTRAKYGFDGSTCGVMTAIDPQSPDIAQGVDVAIEVRGEVNEKELEIGAGDQGMMFGFACDETPELMPLPISLAHRLARRLAQVRKNGTLPYLRPDGKTQVTIEYEDGR----PKRIDTIVISAQHDPDTTQEQIRKDV 216          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.726e-55
Identity = 109/203 (53.69%), Postives = 142/203 (69.95%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            FLFTSESV+ GHPDKL D+ISD++LDA L QDP S+VACET   T + ++ GEI++KA VDYEKIVRDT  ++G+   D+G+D   C+V + ++ QSPDIAQGV+       +DIGAGDQG MFGYA  +T E MPL   L+ ++  R+TE R N    WLRPD K+QVTVEY  +     PVR+  V++S QH   V++DEI
Sbjct:    8 FLFTSESVSMGHPDKLADRISDSILDALLAQDPHSRVACETLVTTGLAVIAGEISSKADVDYEKIVRDTIVAVGYDDPDIGIDGKTCEVQIRLDAQSPDIAQGVNSD-EASGKDIGAGDQGLMFGYACKDTPELMPLPIALSHRIINRITEARFNKEVDWLRPDNKSQVTVEYDGNR----PVRIEAVVVSAQHGPDVSHDEI 205          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACF37.175e-5652.31S-adenosylmethionine synthetase OS=Lactobacillus f... [more]
METK_BACLD7.175e-5653.49S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_PEDPA9.371e-5653.24S-adenosylmethionine synthetase OS=Pediococcus pen... [more]
METK_ALKOO9.371e-5656.34S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_THEAB1.224e-5555.92S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_PROMH1.224e-5556.31S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PHOLL1.224e-5556.80S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_LACS12.088e-5551.63S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_SYMTH2.726e-5553.52S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_RHOBA2.726e-5553.69S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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