DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:147..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.561e-55
Identity = 119/214 (55.61%), Postives = 145/214 (67.76%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPE-------DIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            ME  LFTSESV+EGHPDK+ DQISDA+LDA LE+DP S VACET   T MV VFGEI+T A VD + +VR T   IG+   ++G D ++C V+V+I++QSPDIA GV H   T+  E        IGAGDQG MFG+A  ET E MPL   LA +L  R+  +RK+ T  WLRPD K QVTVEY  +N    P+RV TV+ISTQ D  V+N EI
Sbjct:    1 MERRLFTSESVSEGHPDKVADQISDAILDAMLEKDPNSHVACETIVTTGMVFVFGEISTNAYVDIQDVVRKTILRIGYDRPELGFDGNNCAVMVDIDEQSPDIAGGVDHSLETRENESDQDELDQIGAGDQGLMFGFAIKETPELMPLPISLAHRLMRRVASLRKDHTLDWLRPDAKAQVTVEYDENNN---PLRVDTVVISTQTDAEVSNKEI 211          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_DESPS (S-adenosylmethionine synthetase OS=Desulfotalea psychrophila GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.561e-55
Identity = 108/206 (52.43%), Postives = 146/206 (70.87%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M  +LFTSESV+EGHPDK+ DQISDA+LDA LEQDP+++VACET   T M ++ GEITT A VD  ++VR+T + IG+ S ++G D   C V+  I++QSPDIAQGV+        D GAGDQG MFGYA++ET   MP+   LA +L  R  +VRK+S   WLRPD K+QVT+EY N     +P R+  V++STQHDE+++ +++
Sbjct:   12 MSNYLFTSESVSEGHPDKVADQISDAILDAILEQDPQARVACETLVTTGMALIAGEITTSAWVDMPEVVRNTIKEIGYNSSEMGFDWQSCAVMTTIDKQSPDIAQGVN-EGAGIDLDQGAGDQGLMFGYASNETDVLMPMPITLAHRLTRRQAQVRKSSILPWLRPDAKSQVTIEYEN----KIPKRIDAVVLSTQHDESISYNDL 212          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ANAD2 (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=metK PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.561e-55
Identity = 113/206 (54.85%), Postives = 144/206 (69.90%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            ++ FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DET E MP     A  +  +L + R+ +   +LRPDGK+QV+VEY +      PVR+ TV++STQH E+V+N  +
Sbjct:    3 LQDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELMPAPIQYAHAVTKQLAKARR-AGLDFLRPDGKSQVSVEYRDGR----PVRIDTVVVSTQHAESVSNKRL 195          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THESQ (S-adenosylmethionine synthetase OS=Thermotoga sp. (strain RQ2) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP S+VA ET   T +V++ GE+TT+A V+   I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADL 209          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEP1 (S-adenosylmethionine synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP S+VA ET   T +V++ GE+TT+A V+   I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADL 209          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEMA (S-adenosylmethionine synthetase OS=Thermotoga maritima GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP S+VA ET   T +V++ GE+TT+A V+   I R T   IG+     G D + C VL +I  QSPDIA GV      +         E +GAGDQG MFGYAT+ET E+MPL   LA KL  RL EVRKN T  +LRPDGKTQVT+EY +D     PVRV TVLISTQHD  ++  ++
Sbjct:    4 LFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDK----PVRVDTVLISTQHDPDISQADL 209          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_GEOMG (S-adenosylmethionine synthetase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 113/210 (53.81%), Postives = 147/210 (70.00%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            +M+ ++FTSESV+EGHPDK+ DQ+SD++LDA L QDP ++VACET   T M ++ GEITT A VDY K+VR+T R IG+    +G D + C VLV+I++QSPDI+QGV    G F ++    GAGDQG MFGYA  ET E MP+S   A KL  +L EVRKN    +LRPD K+QV+VEY +D     PVRV TV+IS+QH   V+ + I
Sbjct:    2 EMKDYIFTSESVSEGHPDKVADQVSDSILDAILAQDPRARVACETLVTTGMAVIAGEITTSAVVDYPKVVRETIREIGYNDSAMGFDWETCAVLVSIDKQSPDISQGVTEGEGMFKEQ----GAGDQGLMFGYACTETPELMPMSITYAHKLTQKLAEVRKNGVLDFLRPDSKSQVSVEYVDDK----PVRVDTVVISSQHTPEVSYEAI 203          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 116/214 (54.21%), Postives = 142/214 (66.36%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRP-EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            LFTSESV EGHPDK+CDQISDA+LDA   +DP ++VACET   T +V+V GEITT   VD    VR T R IG+     G DAD C VL +I +QS DIA GV       +G  ++   E IGAGDQG MFGYAT+ET  +MPL+  LA +L  RL+EVRK+    +LRPDGKTQVTVEY ++     PVR+ T++ISTQH    T + I  DL
Sbjct:    5 LFTSESVTEGHPDKICDQISDAILDAIFAKDPNARVACETSVTTGLVLVSGEITTNCYVDIPSTVRQTIREIGYTRAKYGFDADTCAVLTSIGEQSADIALGVDRALEAKNGEMSEEEIEAIGAGDQGMMFGYATNETESYMPLAIDLAHRLARRLSEVRKSDILDYLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDL 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 121/216 (56.02%), Postives = 145/216 (67.13%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ET   T + +VFGE+T+K   D +  VR+T R+IG+ S +VGLDAD C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDET   MPL   LA +L  RLTEVRK+     LRPDGKTQVT+E Y+DN    PVR+ TVLISTQHD  VT D +A +LK
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLVQDPSSHVAVETSAATGVFLVFGEVTSKGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIE-YDDNDK--PVRLDTVLISTQHDPEVTQDWLAVELK 219          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BIFA0 (S-adenosylmethionine synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metK PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55
Identity = 117/219 (53.42%), Postives = 142/219 (64.84%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            E  L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ET        VFGE+T+K   D + IVRDT R IG+ S  +GLDAD C VLV++ +QSP+I QGV    + R   +         GAGDQG MFGYA+DET   MPL   LA +L  RL EVRKN    +LRPDGKTQVT+EY  +N    P+RV TVLISTQHD  V+ + +  DL+
Sbjct:    3 EVKLISAESVTEGHPDKICDQISDAILDDMLRQDPHSHVAVETSATKGQFWVFGEVTSKGYSDIQSIVRDTVRRIGYTSSVIGLDADSCGVLVSLSEQSPEINQGVSRIDSDRENAVSREERYEAQGAGDQGVMFGYASDETDVLMPLPIHLAHRLAYRLAEVRKNGEVKFLRPDGKTQVTIEYDEENR---PLRVDTVLISTQHDPEVSQEALREDLR 218          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LACH43.561e-5555.61S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_DESPS3.561e-5552.43S-adenosylmethionine synthetase OS=Desulfotalea ps... [more]
METK_ANAD23.561e-5554.85S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_THESQ4.651e-5555.24S-adenosylmethionine synthetase OS=Thermotoga sp. ... [more]
METK_THEP14.651e-5555.24S-adenosylmethionine synthetase OS=Thermotoga petr... [more]
METK_THEMA4.651e-5555.24S-adenosylmethionine synthetase OS=Thermotoga mari... [more]
METK_GEOMG4.651e-5553.81S-adenosylmethionine synthetase OS=Geobacter metal... [more]
METK_DESHD4.651e-5554.21S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_BIFLI4.651e-5556.02S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_BIFA04.651e-5553.42S-adenosylmethionine synthetase OS=Bifidobacterium... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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