DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_GLOVI (S-adenosylmethionine synthetase OS=Gloeobacter violaceus GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.074e-55
Identity = 114/221 (51.58%), Postives = 144/221 (65.16%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH----DETVTNDEIAADLK 735
            M  +LF+SESV EGHPDK+CDQISD +LDA L QDP S+VA E    T MV+V GEITT A V++ K+VRD  R IG+   D G  AD C V + +++QSP+IAQGV      R  +      IGAGDQG MFG+A  ET E MPL   +A +L  RL +VRK+ T ++L+PDGK QVTVEY   +G   P R+ T+LISTQH    D+   ND + A +K
Sbjct:    1 MSRYLFSSESVTEGHPDKICDQISDTILDALLTQDPRSRVAAEVVVNTGMVVVTGEITTTANVNFTKLVRDKIREIGYTEADNGFSADSCAVFLALDEQSPEIAQGVSCALEVRTSEEDALDRIGAGDQGLMFGFACTETPELMPLPISVAHRLTRRLAQVRKDGTLAYLKPDGKAQVTVEYERKDGVDRPGRIDTILISTQHAAVIDDLSDNDAVQARIK 221          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_FERNB (S-adenosylmethionine synthetase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.074e-55
Identity = 119/210 (56.67%), Postives = 142/210 (67.62%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH--GHFTK------RPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA +EQDP+++VA ET   T + +V GE+TTKA VD + IVR T   IG+     G D + C VL +I  QSPDIA GV+    F +        E +GAGDQG MFGYAT+ET E MPL  +LA KL  +L EVRKN T  +LRPDGKTQVT+EY  +     PVRV TVLISTQH+  VT  EI
Sbjct:    4 LFTSESVTEGHPDKMADQISDAILDAIIEQDPKARVAVETLLTTGVAIVAGEVTTKAYVDVQDIVRKTVLDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVNEAAEFKQGDKAEDEIEKVGAGDQGMMFGYATNETEELMPLPIMLAHKLAMKLAEVRKNGTVPFLRPDGKTQVTIEYDENE---KPVRVDTVLISTQHEPDVTIPEI 210          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAW (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MW2) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAU (S-adenosylmethionine synthetase OS=Staphylococcus aureus GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAT (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAS (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MSSA476) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_GLOVI6.074e-5551.58S-adenosylmethionine synthetase OS=Gloeobacter vio... [more]
METK_FERNB6.074e-5556.67S-adenosylmethionine synthetase OS=Fervidobacteriu... [more]
METK_STAAW7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAU7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAT7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAS7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAE7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAC7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB7.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA87.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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