DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 112/215 (52.09%), Postives = 147/215 (68.37%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQ+SDA+LDA L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D +   +L  I++QSPDIAQGV      R +D        GAGDQG MFGYAT+ET  +MPL+  L+ +L  RL++VRK+ T ++LRPDGK QVTVEY  NDN    PVR+ T+++STQH E VT ++I  D+K
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDAILKDDPNARVACETTVTTGMALIAGEISTTTYVDIPKVVRETIKEIGYTRAKYGYDYETMAILTAIDEQSPDIAQGVDKALEYRDKDSEEEIEATGAGDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIK 217          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PELTS (S-adenosylmethionine synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 118/210 (56.19%), Postives = 137/210 (65.24%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDAVLDA  E+DP ++VACET   T +V+V GEITT   VD  ++ R+T R IG+     G D D C V+ +I++QS DIAQGV      R         E  GAGDQG MFGYAT ET E MPL   LA +L  RL EVRK+    +LRPDGKTQVTVEY N      PVRV T++ISTQH   VT DEI
Sbjct:    5 LFTSESVTEGHPDKIADQISDAVLDAIFEKDPLARVACETLVTTGLVLVAGEITTDCYVDIPRVARETIREIGYTRAKYGFDCDTCAVITSIDEQSSDIAQGVDRALEVRERYGNEDELEATGAGDQGMMFGYATTETPELMPLPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYENGR----PVRVDTIVISTQHHPRVTLDEI 210          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 113/210 (53.81%), Postives = 149/210 (70.95%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            +M+ F+FTSESV+EGHPDK+ DQ+SDA+LDA L QDP+S+VACET   T M +V GEITT A VDY KIVR+T + IG+    +G D + C VL +I++QSPDIAQGV    G F ++    GAGDQG MFGYA +ET E MP+S +L+ KL  +L +VRK+    +LRPD K+QV+++Y ND     PV V TV+IS+QH   V+ + I
Sbjct:    2 EMKDFIFTSESVSEGHPDKVADQVSDAILDAILTQDPKSRVACETLVTTGMTVVAGEITTNAIVDYPKIVRETIKEIGYNDSAMGFDWETCAVLTSIDKQSPDIAQGVTEGEGLFKEQ----GAGDQGLMFGYACNETPELMPMSILLSHKLVKKLADVRKSGVLDFLRPDSKSQVSIQYINDR----PVHVDTVVISSQHTPEVSYETI 203          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 115/215 (53.49%), Postives = 141/215 (65.58%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+CDQISD++LD  L+ DP ++VACET   T +V+V GEITT   VD  K VR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFGYA +ET E MPL   LA KL  RL+EVRK     +LRPDGKTQVTVEY  +N    PVR+  ++ISTQH   +T ++I  +LK
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDAEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNLK 218          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ANASK (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain K) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.933e-55
Identity = 113/206 (54.85%), Postives = 143/206 (69.42%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            ++ FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DET E MP     A  +  +L + R+ +    LRPDGK+QV+VEY +      PVR+ TV++STQH E+V+N  +
Sbjct:    3 LQDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELMPAPIQYAHAVTKQLAKARR-AGLDLLRPDGKSQVSVEYRDGR----PVRIDTVVVSTQHAESVSNKRL 195          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEM4 (S-adenosylmethionine synthetase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.036e-54
Identity = 120/212 (56.60%), Postives = 141/212 (66.51%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP---------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP S+VA ET   T + +V GE+TT+A VD + IVR T   IG+     G D + C VL +I  QSPDIA GV      +          E +GAGDQG MFGYAT+ET E MPL  +LA KL  +L+E+RK+ T  +LRPDGKTQVTVEY  ND     PVRV TVLISTQH+  VT  EI
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPRSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTIMEIGYTRAKYGFDGETCAVLSSIHSQSPDIAMGVDKALEAKEGELNAQDDLELVGAGDQGMMFGYATNETKELMPLPIMLAHKLALKLSEIRKSGTVPFLRPDGKTQVTVEYDENDR----PVRVDTVLISTQHEPNVTIAEI 211          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SYNS9 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9902) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.036e-54
Identity = 118/222 (53.15%), Postives = 145/222 (65.32%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADL 732
            M  ++FTSESV EGHPDK+CDQ+SDAVLDA L QDP S+VACET   T + M+ GE+T+KAKVD+  +VRD  + IG+      G DA+ C VLV ++QQSPDIAQGV+    H     + +GAGDQG MFGYA +ET E MPL   LA +L  +L EVR N T  +L PDGKTQV+V Y ND     PV + T+LISTQH        DE    + I  DL
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPASRVACETVVNTGLCMITGEVTSKAKVDFIHLVRDVIKEIGYSGARAGGFDANSCAVLVALDQQSPDIAQGVNEADDHAGDPLDLVGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAEVRHNGTLDYLLPDGKTQVSVVYENDQ----PVAIDTILISTQHTAEVGGMSDEQGIRERITEDL 218          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SYNR3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain RCC307) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.036e-54
Identity = 118/222 (53.15%), Postives = 144/222 (64.86%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADL 732
            M  ++FTSESV EGHPDK+CDQ+SDAVLDA L QDP S+VACET   T + ++ GE+TT A+VD+  +VR     IG+ S    G DA+ C VLV ++QQSPDIAQGV     H     + +GAGDQG MFGYA DET E MPL   LA +L  RL EVR N T  +L PDGKTQV+V Y +D     PV + T+LISTQH        DE    + I+ADL
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPASRVACETVVNTGLCIITGEVTTTARVDFNTLVRGVIADIGYSSAKAGGFDANSCAVLVALDQQSPDIAQGVDEADDHAGDPLDKVGAGDQGIMFGYACDETPELMPLPISLAHRLARRLAEVRHNGTLGYLLPDGKTQVSVVYEDDQ----PVAIDTILISTQHIAEIDGISDEKGLRERISADL 218          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SYNS3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9311) GN=metK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.353e-54
Identity = 115/206 (55.83%), Postives = 138/206 (66.99%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 708
            M  ++FTSESV EGHPDK+CDQ+SDAVLDA L QD  S+VACET   T + M+ GE+T+KA+VD+  +VRD  R IG+      G DA  C VLV ++QQSPDIAQGV     H     + +GAGDQG MFGYA +ET E MPL   LA +L  RL EVR N T  +L PDGKTQV+V Y ND     PV + T+LISTQH   VT
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDSTSRVACETVVNTGLCMITGEVTSKAQVDFIHLVRDVIRDIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVDEADDHAGDPLDKVGAGDQGIMFGYACNETPELMPLPISLAHRLARRLAEVRHNGTLDYLLPDGKTQVSVVYENDK----PVEIDTILISTQHTAEVT 202          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_GEOSM (S-adenosylmethionine synthetase OS=Geobacter sp. (strain M21) GN=metK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.353e-54
Identity = 112/210 (53.33%), Postives = 149/210 (70.95%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            +M+ F+FTSESV+EGHPDK+ DQ+SDA+LDA L QDP+S+VACET   T M ++ GEITT A +DY KIVR+T R IG+    +G D + C VL +I++QSPDIAQGV    G F ++    GAGDQG MFG+A +ET E MP+S +LA KL +RL +VRK     +LRPD K+QV+++Y +D     PV V TV+IS+QH   V+ + I
Sbjct:    2 EMKDFIFTSESVSEGHPDKVADQVSDAILDAILTQDPKSRVACETMVTTGMAVIAGEITTNAIIDYPKIVRETIREIGYNDSAMGFDWETCAVLTSIDKQSPDIAQGVTEGEGMFKEQ----GAGDQGLMFGFACNETPELMPMSILLAHKLVSRLADVRKAGVLDFLRPDSKSQVSIQYIDDK----PVHVDTVVISSQHSPEVSYEMI 203          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAA37.933e-5552.09S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_PELTS7.933e-5556.19S-adenosylmethionine synthetase OS=Pelotomaculum t... [more]
METK_GEOUR7.933e-5553.81S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_BACA27.933e-5553.49S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_ANASK7.933e-5554.85S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_THEM41.036e-5456.60S-adenosylmethionine synthetase OS=Thermosipho mel... [more]
METK_SYNS91.036e-5453.15S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNR31.036e-5453.15S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNS31.353e-5455.83S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_GEOSM1.353e-5453.33S-adenosylmethionine synthetase OS=Geobacter sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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