DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRPF (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+   + G  A+   V  ++ +QS DIAQGV+     R  D      IGAGDQG MFG+A +ET E MPL   L+ +L  RL E+RK+   S+LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESREGDTDDLSHIGAGDQGLMFGFAINETPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEATNDQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRPC (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+   + G  A+   V  ++ +QS DIAQGV+     R  D      IGAGDQG MFG+A +ET E MPL   L+ +L  RL E+RK+   S+LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESREGDTDDLSHIGAGDQGLMFGFAINETPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEATNDQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRPB (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+   + G  A+   V  ++ +QS DIAQGV+     R  D      IGAGDQG MFG+A +ET E MPL   L+ +L  RL E+RK+   S+LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESREGDTDDLSHIGAGDQGLMFGFAINETPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEATNDQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRP8 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M18 GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+   + G  A+   V  ++ +QS DIAQGV+     R  D      IGAGDQG MFG+A +ET E MPL   L+ +L  RL E+RK+   S+LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESREGDTDDLSHIGAGDQGLMFGFAINETPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEATNDQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRP3 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M3 GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/215 (53.02%), Postives = 142/215 (66.05%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DPE+ VA ETC  T  V VFGEI+T A +D  ++VRDT   IG+   + G  A+   V  ++ +QS DIAQGV+     R  D      IGAGDQG MFG+A +ET E MPL   L+ +L  RL E+RK+   S+LRPD K+QVTVEY   +    PVRV TV+ISTQHD   TND+I  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETCVYTGSVHVFGEISTTAYIDINRVVRDTIAEIGYTEAEYGFSAESVGVHPSLVEQSGDIAQGVNEALESREGDTDDLSHIGAGDQGLMFGFAINETPELMPLPISLSHQLVRRLAELRKSGEISYLRPDAKSQVTVEYDEHD---KPVRVDTVVISTQHDPEATNDQIRQDV 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/216 (52.78%), Postives = 147/216 (68.06%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP++ VA ET   T  V VFGEI+T A VD  ++VR+T   IG+   + G  A+   V  ++ +QSPDIAQGV+      G   + P D IGAGDQG MFG+A DET E MPL   LA +L  +LT++RK+   ++LRPD K+QVTVEY  ++    P+RV  V+ISTQHD  VTND++  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEYDEND---QPIRVDAVVISTQHDPNVTNDQLHKDV 215          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_STRA1 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype Ia GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/216 (52.78%), Postives = 147/216 (68.06%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            E  LFTSESV+EGHPDK+ DQISDA+LDA LEQDP++ VA ET   T  V VFGEI+T A VD  ++VR+T   IG+   + G  A+   V  ++ +QSPDIAQGV+      G   + P D IGAGDQG MFG+A DET E MPL   LA +L  +LT++RK+   ++LRPD K+QVTVEY  ++    P+RV  V+ISTQHD  VTND++  D+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILEQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRNTIAEIGYDKAEYGFSAESVGVHPSLVEQSPDIAQGVNEALEVRGSLEQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEYDEND---QPIRVDAVVISTQHDPNVTNDQLHKDV 215          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M   LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GE+TT A VD E+I R T R IG+   D+G DAD C +L  I +QSPDI QGV       P++ GAGDQG MFGYA +ET   MP     +  L  R +EVRK+ T  WLRPD K+QVT   YN +G++    +  V++STQH ++V+  ++
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVRDIGYTHSDMGFDADSCAILNVIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYANNETDSLMPAPITYSHMLVKRQSEVRKDKTLPWLRPDAKSQVTFA-YNPDGSI--AGIDAVVLSTQHCDSVSQSDL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 114/201 (56.72%), Postives = 138/201 (68.66%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV 705
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MV+V GEITT A VD E+I R+T R IG+V  D+G DA+ C VL  I +QSPDI QGV         + GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN T  WLRPD K+QVT +Y  D+G +  V +  V++STQH E +
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RSDLLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHAEDI 194          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ROSCS (S-adenosylmethionine synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.160e-52
Identity = 111/221 (50.23%), Postives = 141/221 (63.80%), Query Frame = 1
Query:  100 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE---------DIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADL 732
            K     FTSESV EGHPDK+CDQ+SDAVLDA L  DP ++VACET T T +++V GE+T  +  +  E+IVR T + IG+     G DAD C V+V I  QSPDIAQGV+     R +          IGAGDQG MFG+A +ET E MPL   LA ++G RL+ +RK+    +LRPDGK+QVT+EY        PVRV TVL+S QH   VT ++I  D+
Sbjct:    7 KSPRLFFTSESVTEGHPDKICDQVSDAVLDAFLSHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTIKDIGYTDAAYGFDADTCGVMVAIHGQSPDIAQGVNRALEVRSDGQVTEEEVATIGAGDQGMMFGFACNETPELMPLPIALAHRIGRRLSRLRKDGVLPYLRPDGKSQVTIEYSYGR----PVRVDTVLVSNQHAPDVTQEQIRHDI 223          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRPF2.160e-5253.02S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPC2.160e-5253.02S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPB2.160e-5253.02S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP82.160e-5253.02S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRP32.160e-5253.02S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRA52.160e-5252.78S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA12.160e-5252.78S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_SHEHH2.160e-5253.88S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_SALG22.160e-5256.72S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_ROSCS2.160e-5250.23S-adenosylmethionine synthetase OS=Roseiflexus cas... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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