DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:147..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_NOCSJ (S-adenosylmethionine synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 113/213 (53.05%), Postives = 137/213 (64.32%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+ DQISD+VLDA LE DP S+VA ET   T +V+V GE+TT   VD + +VR     IG+ S   G D   C V+V I  QS DIAQGV      R   +      GAGDQG MFGYA D+T   MPL  V+A +L  +LT VRK+ T  +LRPDGKTQVT+EY  +N    PVRV TV++S+QHDE    D + AD+K
Sbjct:    5 LFTSESVTEGHPDKIADQISDSVLDAMLELDPTSRVAVETLLTTGVVVVAGEVTTTGYVDVKDVVRRRIIEIGYDSSVKGFDGHSCGVMVAIGGQSGDIAQGVDTGHESRTGSVDAMDKQGAGDQGLMFGYACDDTDVLMPLPIVIAQRLAEQLTAVRKDGTLPYLRPDGKTQVTIEYDAENR---PVRVDTVVLSSQHDEDTELDTLEADVK 214          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_NEIMB (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup B GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 105/210 (50.00%), Postives = 143/210 (68.10%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DET   MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD ++  +E+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPSIAYEEL 203          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_MYCCT (S-adenosylmethionine synthetase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            +E  LFTSESV+EGHPDK+CDQISDA+LD  L+QD  +KVACE  T TN +++ G+I++ A VDYE++ RD  + IG+V D  G++A+ CK+ + IE QSPDIAQGV        + IGAGDQG MFGYAT+E+  ++PL+  +A +L    T  RK     W RPD K+QVT++Y N N      ++ T+L+S QHD      E    +K
Sbjct:    5 IEKRLFTSESVSEGHPDKICDQISDAILDEVLKQDKNAKVACEVFTTTNYLLIGGQISSTAIVDYEQVARDVLKKIGYVDDAYGINANTCKIDIKIESQSPDIAQGVE----LSNDQIGAGDQGIMFGYATNESKTYLPLAITIAHELVYNATSQRKKGLFKWARPDMKSQVTIDYTNINNP----KIDTILMSIQHDPNYNEIEFKKYIK 207          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_LEGPL (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Lens) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 106/210 (50.48%), Postives = 137/210 (65.24%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            E ++FTSESV+EGHPDK+ DQISDA+LDA L QDP+++VACE   KT MV+V GEITTKA VD E I R   + IG+ S  +G D + C VL  I +QSPDIAQGV    TK    +GAGDQG MFGYA+ ET  FMP     A +L  +L + RK+    WLRPD K Q+T++Y       +PV V TV+ STQH   + + ++   ++
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEDITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKYEQG----MPVEVDTVVFSTQHSPDIEHKDLVEAIR 205          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 104/205 (50.73%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 104/205 (50.73%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 104/205 (50.73%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50
Identity = 104/205 (50.73%), Postives = 135/205 (65.85%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_SYNJB (S-adenosylmethionine synthetase OS=Synechococcus sp. GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50
Identity = 111/220 (50.45%), Postives = 141/220 (64.09%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR--PED----IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADL 732
            +F+SESV EGHPDK+CDQISDA++DA L  DP S+VA E    T +V++ GEIT++A+V++ ++VRD    IG+     G  A+ C VLV  ++QSPDIAQGV+     R   ED    +GAGDQG MFG+A DET E MPL   LA +L  +L  VRKN T  +LRPDGKTQVTV Y        PV +HT+LISTQH        +E    + I ADL
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNGFCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKNGTLPYLRPDGKTQVTVAYEEGR----PVGIHTLLISTQHTPTIGAITEEAAVQERIRADL 216          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_NEIMA (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup A GN=metK PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.022e-50
Identity = 106/210 (50.48%), Postives = 143/210 (68.10%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DET   MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD +V  +E+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPSVGYEEL 203          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NOCSJ1.548e-5053.05S-adenosylmethionine synthetase OS=Nocardioides sp... [more]
METK_NEIMB1.548e-5050.00S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MYCCT1.548e-5048.34S-adenosylmethionine synthetase OS=Mycoplasma capr... [more]
METK_LEGPL1.548e-5050.48S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_ACIBY1.548e-5050.73S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBT1.548e-5050.73S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS1.548e-5050.73S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC1.548e-5050.73S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_SYNJB2.022e-5050.45S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_NEIMA2.022e-5050.48S-adenosylmethionine synthetase OS=Neisseria menin... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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