DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.449e-50
Identity = 108/215 (50.23%), Postives = 137/215 (63.72%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            LFTSESV EGHPDK+CDQISD++LDA L QDP S+ A ET   T +V V GE+TT   VD  +IVRD  R IG+ S +VG D  +C V V+I  QSPDIAQGV   +  R            GAGDQG MFGYA+ +T  FMPL   LA +L  RL  VR +   ++LRPDGKTQVT+ Y      +VP  V TV++STQH   V+ +++  +++
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGELAYLRPDGKTQVTIGY----EGLVPRTVDTVVLSTQHGPQVSQEDLRREVE 216          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 103/207 (49.76%), Postives = 139/207 (67.15%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 723
            F+FTSESV+EGHPDK+ DQ+SDAVLDA L QD  ++VACET   T + ++ GEITT A +DY +I R T + IG+ S D+G D + C VLV + +QSPDIAQGV   H  +     D GAGDQG MFGYA +ET   MP+   LA +L  R +E+RK+    WLRPD K+QV++ Y +      P  + TV++STQHD  V++ +++
Sbjct:    5 FIFTSESVSEGHPDKMADQVSDAVLDAILTQDKHARVACETLLTTGLCVIAGEITTTAVIDYNQIARQTIKRIGYDSSDIGFDYNTCSVLVTVGKQSPDIAQGVDRAHDDYL----DQGAGDQGLMFGYACNETPVLMPMPIHLAHRLTERQSELRKDGRLPWLRPDAKSQVSIRYVDGK----PHSIDTVVLSTQHDPEVSHAQLS 203          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DET   MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD  +  +E+
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPEIGYEEL 203          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_MOOTA (S-adenosylmethionine synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 107/213 (50.23%), Postives = 136/213 (63.85%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH----DETVTNDEI 720
            LFTSESV EGHPDK+ D+I+DAVLDA   +D +++VACE    T +++V G+ITT   VD  ++ R+T R IG+     G D D C V+ +I++QSPDIA GV+  + K+        E +GAGDQG MFGYAT ET EFMP+   LA  L  RL  VRK     +LRPDGK+QVTVEY +      PVRV TV+ISTQH    D     DE+
Sbjct:    5 LFTSESVTEGHPDKIADRIADAVLDAIYAKDNQARVACECLVSTGLILVAGQITTDCYVDIPRVARETVREIGYTRAKFGFDCDTCAVITSIDEQSPDIAMGVNEAWEKKQGEARDEVETLGAGDQGMMFGYATSETPEFMPMPIALAHALTRRLAAVRKERILPYLRPDGKSQVTVEYEDGR----PVRVDTVVISTQHRPDIDMATLRDEV 213          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_CYAP4 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 106/207 (51.21%), Postives = 137/207 (66.18%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV 705
            + +LFTSESV EGHPDK+CDQISD +LDA L QDP+S+VA E    T +V++ GEIT++A+V+Y  +VR     IG+ S + G  A  C VLV +++QSPDIAQGV+     R        + IGAGDQG MFG+A +ET EFMPL   LA ++  +L  VRK     +LRPDGKTQVTV Y +      PV + T+LISTQH  T+
Sbjct:    3 QRYLFTSESVTEGHPDKICDQISDTILDALLSQDPQSRVAAEVVVNTGLVLITGEITSQAQVNYVDLVRKKITEIGYTSAENGFCATSCAVLVALDEQSPDIAQGVNVAQESRQQLSDEALDRIGAGDQGIMFGFACNETPEFMPLPISLAHRMARKLAAVRKTHQLPYLRPDGKTQVTVIYEDGR----PVGIDTILISTQHTPTI 205          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 708
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENIT 195          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 708
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENIT 195          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.504e-50
Identity = 106/202 (52.48%), Postives = 136/202 (67.33%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 708
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENIT 195          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50
Identity = 103/203 (50.74%), Postives = 140/203 (68.97%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            + FTSESV+EGHPDK+ DQISDA+LDA L QDP ++VA ET   T +V++ GEITT A VDY ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DETSE MP+   L+ +L  R +++R++   +WLRPD K+QVT+ Y +      P  + TV++STQHDE ++ +++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDD-GLDQGAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEISLEKL 202          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50
Identity = 104/204 (50.98%), Postives = 137/204 (67.16%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIA 723
            FLFTSESV+EGHPDK+ DQISD VLDA L +DP+++VACET   T +V++ GEITT A  +Y +I +D  R IG+ + D+G D   C VL  I +QS DIAQGV+        D GAGDQG MFGYAT+ET   MPL    A ++  R  EVRK+    WLRPD K+Q+TV+Y +      PV + TV++STQH+  V++ +I+
Sbjct:    5 FLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN-EGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK----PVAIDTVVVSTQHNPEVSHAQIS 203          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLAM33.449e-5050.23S-adenosylmethionine synthetase OS=Clavibacter mic... [more]
METK_THIDA4.504e-5049.76S-adenosylmethionine synthetase OS=Thiobacillus de... [more]
METK_NEIM04.504e-5050.00S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MOOTA4.504e-5050.23S-adenosylmethionine synthetase OS=Moorella thermo... [more]
METK_CYAP44.504e-5051.21S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_BUCAT4.504e-5052.48S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI4.504e-5052.48S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA54.504e-5052.48S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_POLSQ5.883e-5050.74S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_AZOSB5.883e-5050.98S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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