DR403988

Overview
NameDR403988
Unique NameDR403988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_THEFY (S-adenosylmethionine synthetase OS=Thermobifida fusca (strain YX) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.236e-49
Identity = 109/204 (53.43%), Postives = 130/204 (63.73%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI-------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH 693
            M   LFTSESV EGHPDK+ DQISDA+LD+ L  DP S+VA ET   T +V V GE+TT   VD   I+R+    IG+ S   G D   C V V+I  QSPDIAQGV   +  R E+I       GAGDQG MFGYA +ET E MPL   LA  L  RL EVR++ T  +LRPDGKTQVTVEY  +     PVR+ TV++S+QH
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDAILDSMLRDDPHSRVAVETLITTGLVHVAGEVTTSTYVDIPTIIREKILEIGYDSSAKGFDGASCGVSVSIGGQSPDIAQGVDNAYEAREEEIFDDLDRQGAGDQGLMFGYANNETPELMPLPITLAHALSQRLAEVRRDGTIPYLRPDGKTQVTVEYDGNR----PVRLDTVVVSSQH 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PSYWF (S-adenosylmethionine synthetase OS=Psychrobacter sp. (strain PRwf-1) GN=metK PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.236e-49
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV+EGHPDK+ DQISDA+LDA + +D  ++VACET  KT  V++ GEI+T A +D E+IVRDT  SIG+   D+G D + C V+  I +QSP+IAQGV       PED GAGDQG MFGYA++ET   MP     A +L  R +E+R++    WLRPD K QVT++Y N      P  +  V++STQHD  ++  ++
Sbjct:    6 LFTSESVSEGHPDKMADQISDALLDAIMREDLHARVACETLVKTGAVVLAGEISTTANIDIERIVRDTVNSIGYNHSDLGFDGETCAVINMIGKQSPEIAQGVD---RMNPEDQGAGDQGLMFGYASNETEVLMPAPIEFAHRLMERQSELRRSGELKWLRPDAKAQVTLKYTNG----TPSAIDAVVLSTQHDPDISQADL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_XANCB (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 106/208 (50.96%), Postives = 136/208 (65.38%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDL 201          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_XANC8 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 106/208 (50.96%), Postives = 136/208 (65.38%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDL 201          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 103/203 (50.74%), Postives = 137/203 (67.49%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            FLFTSESV+EGHPDK+ DQISDA+LDA  +QDP+++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MP +   A ++  R +E+RK+    WLRPD K+QVT+ Y +      PV + T+++STQH   + + +I
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFQQDPKARVAAETLCNTGLVVLAGEITTFANVDYIEVARDTIKRIGYDNADYGIDYKSCSVLVAYDKQSPDIAQGV-DEGAGIDLDQGAGDQGLMFGYACDETPELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDI 202          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_CYAP8 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 8801) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.920e-49
Identity = 106/219 (48.40%), Postives = 138/219 (63.01%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV----TNDEIAADLK 735
            +LF+SESV EGHPDK+CDQISD +LDA L  D  S+VA E    T +V++ GEIT+KA V++ ++ R     IG+   D G  A+ C VLV I++QSPDI+QGV     +R        + IGAGDQG MFGYA +ET EFMPL   LA ++  RL  VRK     +LRPDGKTQV++ Y +      PV + T+LISTQH ET+     N  + A +K
Sbjct:    5 YLFSSESVTEGHPDKICDQISDTILDALLYHDDHSRVAAEVVVNTGLVLITGEITSKAHVNFVELARKKIAEIGYTDADNGFSANSCAVLVAIDEQSPDISQGVSAAHEQRESLSNDELDQIGAGDQGIMFGYACNETPEFMPLPISLAHRISRRLAAVRKMGELPYLRPDGKTQVSIVYEDGK----PVGIDTILISTQHTETIDSLTENSAVQAKIK 219          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49
Identity = 110/207 (53.14%), Postives = 135/207 (65.22%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLK 735
            +FTSESV+EGHPDKL DQISDAVLDA L  DP ++VACET  KT + +V GEITT A VD E +VR   + I + S +VG D D C V+  I +QS DIAQGV     ++PED GAGDQG MFGYA++ET   MP     + +L  R  E RK+    WLRPD K+QVT  Y  +NG +  V +  V++STQHD  VT     ADLK
Sbjct:    6 IFTSESVSEGHPDKLADQISDAVLDAILTDDPHARVACETMVKTGVAIVGGEITTSAWVDLEDLVRGVIKDIDYTSSEVGYDGDTCGVINIIGKQSVDIAQGVD---RQKPEDQGAGDQGLMFGYASNETDVLMPAPITFSHRLVQRQAEARKSGLLPWLRPDAKSQVTCRY--ENGKV--VGIDAVVLSTQHDPDVTQ----ADLK 201          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_CYAP7 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 7424) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.813e-49
Identity = 103/205 (50.24%), Postives = 134/205 (65.37%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETV 705
            +LFTSESV EGHPDK+CDQISD +LDA L QDP S+VA E    T +V++ GEIT+KA+V+Y  + R     IG+   + G  A+ C VLV +++QSPDI+QGV     +R        + IGAGDQG MFG+A +ET E MP+   LA ++  RL  VRK     +LRPDGKTQV+V Y +      PV + T+LISTQH ET+
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDALLSQDPYSRVAAEVVVNTGLVLITGEITSKAQVNYVDLARQKIAEIGYTDSNNGFSANSCAVLVALDEQSPDISQGVTKAQERREQLSDDELDHIGAGDQGLMFGFACNETPELMPMPISLAHRIARRLAAVRKTGELPYLRPDGKTQVSVIYEDGK----PVGIDTILISTQHTETL 205          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49
Identity = 101/202 (50.00%), Postives = 135/202 (66.83%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEI 720
            LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT  V++ GEITT A +D E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R +E+R+     WLRPD K QVT++Y  +     PV +  V++STQHD +++  ++
Sbjct:    6 LFTSESVSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVVLAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQVTLKYDGNK----PVAIDAVVLSTQHDPSISQADL 200          
BLAST of DR403988 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.980e-49
Identity = 107/202 (52.97%), Postives = 135/202 (66.83%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVT 708
            M   LFTSESV+EGHPDK+ DQISD VLDA L QD +++VACET  KT MV+V GEITT A +D E++ R+T R IG+ + ++  DA+ C VL  I +QSPDI +G++      P + GAGDQG MFGYAT+ET   MP     A +L AR + VRKN T  WL PD K+QVT  Y  D G +  V + TV+ STQH E +T
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDTVLDAILAQDLKARVACETYVKTGMVLVGGEITTNAWIDIEELTRNTIRDIGYTNSEMKFDANSCAVLSIISKQSPDINKGIN---NIDPREQGAGDQGFMFGYATNETDVLMPAPITYAHRLVARQSLVRKNGTLPWLCPDAKSQVTFAY--DEGKV--VGIDTVVFSTQHVENIT 195          
The following BLAST results are available for this feature:
BLAST of DR403988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THEFY2.236e-4953.43S-adenosylmethionine synthetase OS=Thermobifida fu... [more]
METK_PSYWF2.236e-4950.00S-adenosylmethionine synthetase OS=Psychrobacter s... [more]
METK_XANCB2.920e-4950.96S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC82.920e-4950.96S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_HERAR2.920e-4950.74S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_CYAP82.920e-4948.40S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_MARAV3.813e-4953.14S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_CYAP73.813e-4950.24S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_PSYCK4.980e-4950.00S-adenosylmethionine synthetase OS=Psychrobacter c... [more]
METK_BAUCH4.980e-4952.97S-adenosylmethionine synthetase OS=Baumannia cicad... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O17 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403988 ID=DR403988; Name=DR403988; organism=Citrus sinensis; type=EST; length=736bp
GGGGGCCCAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCGGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCTCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCC
GATGGGAAGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCAT
GGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGATGAGA
CTGTCACAAATGATGAAATTGCTGCTGACCTTAAGG
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