CX069700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 6.508e-68 Identity = 123/219 (56.16%), Postives = 163/219 (74.43%), Query Frame = -1 Query: 184 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 840 PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR++ILKIH+ + ID + I + G +GA+L+ +CTEAGMFA+R R +V EDF AV K+ + + ++ S Sbjct: 173 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSS 390 HSP 2 Score: 31.9574 bits (71), Expect = 6.508e-68 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = -3 Query: 827 IKEVIELPIKHPELFESLGIAQPQGCI 907 ++E IELP+ +PELF +GI P+G + Sbjct: 151 LRESIELPLMNPELFLRVGIKPPKGVL 177
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.509e-68 Identity = 121/224 (54.02%), Postives = 166/224 (74.11%), Query Frame = -1 Query: 172 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 840 PKGVLLYGPPGTGKTLLARA+A + + F++V S +V KYIGE +R++RE+F AR+H P +IFMDEID+IG R G+ + D E+QRT++ELLNQ+DGF+ +K+K++MATNR D+LD ALLRPGR+DRKIE P PNE R+D+LKIH+ + +D + IA+ +G + A+L+ VCTEAGMFA+R R +V +EDF AV K + K+ E + +K+ Sbjct: 171 PKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDYQKV 393 HSP 2 Score: 32.3426 bits (72), Expect = 6.509e-68 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = -3 Query: 827 IKEVIELPIKHPELFESLGIAQPQGCI 907 ++EV+ELP+ PELF +GI P+G + Sbjct: 149 LREVVELPLMIPELFIRVGIKAPKGVL 175
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 3.198e-67 Identity = 120/213 (56.34%), Postives = 164/213 (77.00%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED+ + +V K+ Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431 HSP 2 Score: 30.8018 bits (68), Expect = 3.198e-67 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E FE+LGI P+G + Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVL 224
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 246.514 bits (628), Expect = 3.198e-67 Identity = 120/213 (56.34%), Postives = 164/213 (77.00%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR +T ED+ + +V K+ Sbjct: 220 PKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 431 HSP 2 Score: 30.8018 bits (68), Expect = 3.198e-67 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E FE+LGI P+G + Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVL 224
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.171e-67 Identity = 122/213 (57.28%), Postives = 163/213 (76.53%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + +IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 205 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416 HSP 2 Score: 29.6462 bits (65), Expect = 4.171e-67 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E FE LG+ P+G + Sbjct: 185 EAIVLPMTHKERFEKLGVRPPKGVL 209
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.171e-67 Identity = 122/213 (57.28%), Postives = 163/213 (76.53%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + +IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 205 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 416 HSP 2 Score: 29.6462 bits (65), Expect = 4.171e-67 Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E FE LG+ P+G + Sbjct: 185 EAIVLPMTHKERFEKLGVRPPKGVL 209
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 4.172e-67 Identity = 122/213 (57.28%), Postives = 165/213 (77.46%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR VT EDF + +V K+ Sbjct: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKK 415 HSP 2 Score: 28.4906 bits (62), Expect = 4.172e-67 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E F+ LG+ P+G + Sbjct: 184 EAIVLPMTHQERFQKLGVRPPKGVL 208
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 246.899 bits (629), Expect = 4.172e-67 Identity = 121/213 (56.81%), Postives = 165/213 (77.46%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K+ Sbjct: 204 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415 HSP 2 Score: 30.0314 bits (66), Expect = 4.172e-67 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H E FE LGI P+G + Sbjct: 184 EAIVLPMTHKEQFEKLGIRPPKGVL 208
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 248.44 bits (633), Expect = 7.093e-67 Identity = 122/213 (57.28%), Postives = 165/213 (77.46%), Query Frame = -1 Query: 202 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 840 PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + +IKV+ ATNR DILD AL+R GR+DRKIEFP+P+EE+R IL+IHSR+MN+ ++ +++A + +GA+LKAVC EAGM ALR VT EDF + +V K+ Sbjct: 210 PKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKK 421 HSP 2 Score: 27.7202 bits (60), Expect = 7.093e-67 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 827 EVIELPIKHPELFESLGIAQPQGCI 901 E I LP+ H + F+ LGI P+G + Sbjct: 190 EAIVLPMTHKDRFQKLGIRPPKGVL 214
BLAST of CX069700 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 9.251e-67 Identity = 129/219 (58.90%), Postives = 164/219 (74.89%), Query Frame = -1 Query: 187 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNM 840 PKGVLLYG PGTGKTLLA+AVAH T+ TFIRV GSELVQKYIG+GS++VRE+F MAR+ APSIIF+DE+DSI + R+ +G D EVQRT+++LL ++DGF+ I+++ ATNR D+LD A+LRPGR DR + P P E+R ILKIH +M L ID KK+A+ G SGA+LKA+ TEAGMFA+R+ + V EDF AV KV M +T+K M Sbjct: 193 PKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTG-ADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKVSMAADTQKMM 410 HSP 2 Score: 29.6462 bits (65), Expect = 9.251e-67 Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = -3 Query: 827 IKEVIELPIKHPELFESLGIAQPQGCI 907 ++E +ELP+ PE F +GI P+G + Sbjct: 171 LQEAVELPLIEPERFARIGIEPPKGVL 197 The following BLAST results are available for this feature:
BLAST of CX069700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 389
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069700 ID=CX069700; Name=CX069700; organism=Citrus sinensis; type=EST; length=909bpback to top |