CX069699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.912e-24 Identity = 67/200 (33.50%), Postives = 109/200 (54.50%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 602 F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ ++ L + + + G E Q EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKE---------------------QLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 65/196 (33.16%), Postives = 102/196 (52.04%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 590 F+ CK PKA T+L RG+++ ++ EV R + DA+ V + ++ K+V GGGATE+ ++ L++ + S+ G E+ + F A A E IPRTLA+N G++ I + L+ H G+D G + DM E + + VK Q +A EA+ MLLRIDD+++ K K G+ Sbjct: 359 FVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAF---------------------ADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKGDEKGGE 533
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.431e-23 Identity = 67/205 (32.68%), Postives = 111/205 (54.15%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAI-SDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIE 614 FI K+PK+ T+LLRGA+ LL+E ERN++DA+ RNI++ PK+V GGGA E+ ++ LK+ + ++ G +Q EA A A E IP LA++ G++ + + L+ H+ G + G++ G I DM + +++ VK Q K+A EAA +L+IDD+++ K+ G+ + + E Sbjct: 364 FIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTVGG---------------------KQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYK-FAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIAAAPPKKKEKKGKTGEEEEEE 546
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.431e-23 Identity = 64/203 (31.53%), Postives = 96/203 (47.29%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK-QAPGSGQAPSKPQ 608 F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ KHA G W G+D N I+D E +W+ V+ A EAAC+++ +D+ + + AP G+ + Q Sbjct: 360 FFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRAKHAQG-GMWYGVDVNNEDIADNFEACVWEPAIVRINALTAASEAACLIVSVDETIKNPRSTVDAPPGGRGRGRGQ 540
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.480e-23 Identity = 64/200 (32.00%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQ 590 F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D NT I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ Sbjct: 360 FFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDASPAAGRGR 537
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.643e-23 Identity = 64/205 (31.22%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQAPSKP 605 F C K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D N I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 360 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPAAAGRGRGRGRP 542
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.643e-23 Identity = 64/205 (31.22%), Postives = 96/205 (46.83%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQAPSKP 605 F C K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D N I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 360 FFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRP 542
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.703e-22 Identity = 68/198 (34.34%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAIS-DMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 590 FI K+PKA +LLRG++ L+E ER++ DA+ RN++ P +V GGGA E ++ L++ + S+ G E+ +F A A E IP LA+ G+ I+T+ L+ KHA G NA G+D G I+ DM + + VKAQ K+A+EAA +L+IDD+++ K G+ Sbjct: 368 FIEGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREYARSVGGKEQLAIEKF---------------------AEALEEIPMILAETAGMEPIQTLMDLRAKHAKGLINA--GVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAAPLKSGEKKGE 542
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22 Identity = 61/184 (33.15%), Postives = 104/184 (56.52%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 F+ D ++ K+ T++LRG ++ +++EVER ++D++ V R +++ +++PGGGA E ++ L+ + S+ G E Q EA A A E IPRTLA+N G + I ++ L+ +H G+ G+D G + DM+ I + VK Q ++A EAA M+LRIDD+++ Sbjct: 359 FVEDVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDFADSVGGRE---------------------QLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGGDTE-AGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIA 520
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.904e-22 Identity = 63/204 (30.88%), Postives = 95/204 (46.57%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP-------GSGQA 593 F C K CT++LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D N I+D + +W+ V+ A EAAC+++ +D+ + + P G GQA Sbjct: 360 FFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GMWYGVDINNENIADNFQAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDPPAPSAGRGRGQA 541 The following BLAST results are available for this feature:
BLAST of CX069699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069699 ID=CX069699; Name=CX069699; organism=Citrus sinensis; type=EST; length=840bpback to top |