CX069699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 15 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAP 596 C K CT+LLRG ++ ++ EVER+L DA+ + + ++N +V GGGATE+ VS L+ S +I G ++ + F A A E IPR L +N G + I + L+ H+ GE W G+ T I D +W+ VK +A EA ++L +D+ ++ K ++ +G P Sbjct: 368 CPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAF---------------------AKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEK-WYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITN-KGSESANAGMMP 538
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 61/184 (33.15%), Postives = 96/184 (52.17%), Query Frame = 3 Query: 6 IVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 I C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E ++ V A E +L+IDD+V+ Sbjct: 379 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVN 540
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 632 FI K+PKA ++L+RG + +++E ER L+DA+ +++++ + + GGGA E ++ L++ + + G E Q EA A A E++ L +N G + I + L+ H N N W GI+ TG I DM + + VK K A EA+ ++LRIDD++S KK + G+ K + E + D Sbjct: 369 FIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKE---------------------QLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKKSE----GKTGEKKESEKGKEED 553
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADADSEQI 644 FI K+ KA +LLRG++ L+E ER++ DA+ RNI+ P ++PGGGA EL ++ L++ + S+ G E Q EA A A E IP LA+ G+ I + L+ +HA G N + + G + D+ I + VKAQ K+A EAA +L+IDD+++ K G+ SK + E A + + Sbjct: 367 FIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKE---------------------QLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDVIGGK-IVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEG-SKEESGGEGGAGTPSL 558
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20 Identity = 61/184 (33.15%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 6 IVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 I C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 376 ITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20 Identity = 61/184 (33.15%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 6 IVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 I C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 376 ITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20 Identity = 62/208 (29.81%), Postives = 105/208 (50.48%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 626 F+ K+PK+ ++L+RG + +++E ER L+DA+ ++I++ + V GGGA E+ ++ L++ + + G E Q EA A A E + LA+N G++ I + L+ H N N W G++ TG DM + + + VK K A EA ++LRIDDIV+ KK + SG+ + ++ D Sbjct: 368 FVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKE---------------------QLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVAAGKKSGSEPSGKKEKDKEEKSSED 554
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20 Identity = 60/199 (30.15%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG-IKKKQAPGSGQAP 596 F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ ++ + + + G E F A A + IP+TLA+N G++ + + + +H N + IGID G +DM E I V Q K+A AA M+LRIDD+++ + K + + P Sbjct: 362 FVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENF---------------------ADALKIIPKTLAENAGLDTVEILVKVISEHKN-KGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIKSA-RAAIMILRIDDVIAAKVSKPEGRQGAECP 537
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20 Identity = 56/181 (30.94%), Postives = 96/181 (53.04%), Query Frame = 3 Query: 6 IVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548 I C + KA T+ +RG +K +++E +R L DA+ V RN++++ ++V GGG+ EL + + +++ I+GIE++ FR F A A E+IP LA+N G+ I ++ L+ K + +GID +DMKE K+ + K + A + M+L+IDD+ Sbjct: 373 IEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAF---------------------ADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 2.081e-20 Identity = 61/184 (33.15%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 6 IVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 I C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 376 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537 The following BLAST results are available for this feature:
BLAST of CX069699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069699 ID=CX069699; Name=CX069699; organism=Citrus sinensis; type=EST; length=840bpback to top |