CX069699

Overview
NameCX069699
Unique NameCX069699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPQ_CHICK (T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   18 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 626
            +D    T+L+RG++ +L++++ER + D ++  + + ++ +LVPGGGATE+ ++  +     +  G++++  ++F                     A AFEAIPR LA+N GV     ++ L   H  G +N    I+    A+ DM E  I D Y  K    K A  AA  +LR+D I+        P  G  P   + + + D
Sbjct:  368 EDGAISTILIRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKF---------------------AEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGFDIEAEAAAVKDMLEAGILDTYLGKYWGIKLATNAAVTVLRVDQIIMA-----KPAGGPKPPSGKKDWDED 545          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 63/186 (33.87%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISD-MKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578
            KA TV+++G++  + +E ER+L DA +  RN++  P +V GGGA E  ++  L++ +  + G E+  F  F                     A A E     L++  G++ I  +T ++ KHANG +NA  GID     I D M E K+ D+  VK Q  K+A EAA  +L+IDD+++    KQ P
Sbjct:  363 KAVTVIIKGSNNMVTDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRENAGKVPGKEQLAFNAF---------------------ADALEEYVSILSETAGMDPISALTEIRHKHANGLKNA--GIDIVKARIYDNMLELKVIDSLKVKEQVLKSATEAATAILKIDDMIAAAPAKQQP 525          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 55/182 (30.22%), Postives = 98/182 (53.85%), Query Frame = 3
Query:    6 IVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 551
            I  C + +A TV +RG++K +++E +R L DA+ V RN+I++ ++V GGGA E++ S  + +++  I GI+                     Q+   A A A + IP  LA+N G++ I  +TA++ +H     A++GID      +DM++  + D    K Q    A +   M+L+++DI+
Sbjct:  376 IEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGID---------------------QYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDII 536          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   36 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548
            +V++RGA+  +L+E ER+L DA+ V R ++K   L+ GGGA E+ +S  L+++S S+EG+E ++++ F                     A A E IP TLA+N G+N I+ +T L+ +H NG+    GI       ++  E  I     V       A E    +LRIDDI
Sbjct:  377 SVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEF---------------------AQALEVIPTTLAENAGLNSIKVITELRSRHENGD-VNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18
Identity = 58/184 (31.52%), Postives = 95/184 (51.63%), Query Frame = 3
Query:    6 IVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554
            I  C  P K  ++++RG++K ++ E ER++ DA+ V R ++K   L+ GGGA E+ ++  L + S ++ G+E +  R                     A + A E IP TLA+N G+N I T+T L+ +HA G+    GI+   G IS++ E  +     V       A E    +L+IDD+V+
Sbjct:  373 ITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVR---------------------AYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDK-MAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVN 534          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18
Identity = 59/179 (32.96%), Postives = 92/179 (51.40%), Query Frame = 3
Query:   15 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 551
            CK  +ACT++LRGA+   L+E ER+L DA+SV     K  + V GGG  E+ +S  +  ++ +I+G                      K    EA A A   +P  LA N G +    ++ L+    NG +   G+D N G I+DM++  I ++Y +K     +A EAA +LLR+D+I+
Sbjct:  359 CKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDG---------------------KKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGIST-SGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNII 515          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18
Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 3
Query:   36 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548
            +++ RGA++ +L+E ER++ DA+ V R ++K   L+ GGGA E+ VS  L  +++ + G+E+++++ F                     A A E IP TLA+N G+N I  +T L+ +HANGE    GI       S+  +  +     V +     A E    +LRIDDI
Sbjct:  381 SIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGGAPEIEVSRVLMSEANKLSGVEQFVYQEF---------------------AQALEVIPTTLAENAGLNSINVVTDLRNRHANGEKN-AGISVRRSGASNTYDEHVLQPVLVSSSAITLASECVKSILRIDDI 529          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.323e-18
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 3
Query:   36 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548
            +V++RGA+  +++E ER+L DA+ V R ++K   L+ GGGA E+ +S  L +++ S+EG++ ++++ F                     A A E IP TLA+N G+N I+ +T L+ KH NGE    GI       ++  E  I     V       A E    +LRIDDI
Sbjct:  376 SVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEF---------------------ASALEVIPTTLAENAGLNSIKVVTELRSKHENGE-LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4)

HSP 1 Score: 92.0485 bits (227), Expect = 4.340e-18
Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 3
Query:   27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578
            +ACT++LRGA++ +L+E ER+L DA+ V    +K+P+ V GGG +E+ ++  + Q ++   G E      F                     A A   +P  +A N G +    +  L+  H+ G +   G+D   G I DM    I +++ VK Q   +A EAA ++LR+D+I+    +K+ P
Sbjct:  369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESF---------------------AKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-HITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530          
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18
Identity = 57/171 (33.33%), Postives = 90/171 (52.63%), Query Frame = 3
Query:   36 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548
            +V++RGA+  +L+E ER+L DA+ V R ++K   L+ GGGA E+ VS  L +++ ++EG+E ++++ +                     A A E IP TLA+N G+N +  +T L+ +H NGE+   GI       S+  E  I     V     + A E    +LRIDDI
Sbjct:  378 SVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSYRLMKEARTMEGVEAFVWQEY---------------------AEALEVIPTTLAENAGLNSLNVVTELRLRHENGESN-SGISVRRSGTSNTYEDHILQPVLVSTSAIRLASECVKSILRIDDI 526          
The following BLAST results are available for this feature:
BLAST of CX069699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
TCPQ_CHICK5.126e-1928.43T-complex protein 1 subunit theta OS=Gallus gallus... [more]
THSG_SULSH6.695e-1933.87Thermosome subunit gamma OS=Sulfolobus shibatae GN... [more]
TCPE_SCHPO6.695e-1930.22T-complex protein 1 subunit epsilon OS=Schizosacch... [more]
TCPD_CANGA8.744e-1933.92T-complex protein 1 subunit delta OS=Candida glabr... [more]
TCPD_TAKRU1.492e-1831.52T-complex protein 1 subunit delta OS=Takifugu rubr... [more]
TCPB_YEAST1.492e-1832.96T-complex protein 1 subunit beta OS=Saccharomyces ... [more]
TCPD_DEBHA2.544e-1832.16T-complex protein 1 subunit delta OS=Debaryomyces ... [more]
TCPD_YEAST3.323e-1833.33T-complex protein 1 subunit delta OS=Saccharomyces... [more]
TCPB_MOUSE4.340e-1829.89T-complex protein 1 subunit beta OS=Mus musculus G... [more]
TCPD_KLULA7.402e-1833.33T-complex protein 1 subunit delta OS=Kluyveromyces... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C05-F10-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069699 ID=CX069699; Name=CX069699; organism=Citrus sinensis; type=EST; length=840bp
CATTCATTGTTGATTGCAAAGATCCAAAAGCTTGTACTGTACTCTTAAGA
GGTGCTAGTAAGGATCTCCTGAATGAAGTGGAAAGGAATTTGCAGGATGC
AATGTCTGTGGCAAGAAACATAATCAAGAATCCAAAACTAGTACCTGGTG
GTGGGGCTACAGAATTAACAGTGTCTGCCACTCTAAAACAAAAGAGTTCC
TCAATCGAAGGCATCGAAAAGTGGCTTTTCCGCCGTTTTTGTTATTCATC
AGCCTGACATCCATGCTTCATCATTGTAAAACAGTGGCCTTACGAAGCTG
CTGCTATTGCTTTTGAGGCTATTCCAAGAACTTTGGCTCAGAATTGTGGC
GTTAATGTAATTCGGACTATGACTGCTCTGCAAGGAAAACATGCAAATGG
TGAAAATGCATGGATCGGCATAGATGGAAACACTGGTGCAATTTCTGACA
TGAAAGAGGGGAAGATCTGGGATGCATATAATGTGAAAGCACAGACATTT
AAGACAGCAATTGAAGCTGCTTGCATGCTTCTGAGGATTGATGACATTGT
CAGTGGAATTAAGAAGAAACAGGCCCCTGGCTCAGGCCAAGCTCCATCGA
AGCCCCAGATTGAGACGGAGGCAGATGCAGATAGTGAGCAAATACTCCCT
GATTAGACAATGTTATTGTCAACGACTATGCAGTTTAATTATTTGAAAAA
ATGTTGGTTTATTGTTCTGTTGGCGGTCTAATGATTTTGCTGAGCTTTTC
CTCCAAATTTTGTGATATTGCGCCAATGTTTTAGCCATTGTAGACAAACT
GGGAAGCTGTGATATGCTCTGCAATATATATATATATTTT
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