CX069699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18 Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578 +ACT++LRGA++ +L+E ER+L DA+ V +K+P+ V GGG +E+ ++ + +S G E F A A +P +A N G + + L+ H+ G G+D G+I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAMESF---------------------AKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-RITAGLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18 Identity = 55/183 (30.05%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 575 +AC+V+LRGA++ +L+E ER+L DA+ V +K K V G GA+E+ +S+ + ++ + G E EA A +P + N G++ +T L+ +HANG + +GID G ++D+ + + ++YNVK +A EA +LR+DDI+ + +A Sbjct: 363 EACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKE---------------------ALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHN-MGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKAAPRARA 523
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 7.402e-18 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578 +ACT++LRGA++ +L+E ER+L DA+ V +K+ + V GGG +E+ ++ + Q +S G E E+ A A +P +A N G + + L+ H+ G+ G+D G I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAM---------------------ESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTT-AGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 61/186 (32.80%), Postives = 96/186 (51.61%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISD-MKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578 KA TV+++G++ + +E ER+L DA + RN++ P +V GGGA E ++ L+ + + G E+ F F A A E L++ G++ I +T ++ KHA G +NA GID I D M E ++ D+ VK Q K+A EAA +L+IDD+++ KQ P Sbjct: 363 KAVTVIIKGSNNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAF---------------------ADALEEYVSILSETAGMDPISALTEIRHKHATGLKNA--GIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMIAAAPAKQQP 525
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.668e-18 Identity = 54/178 (30.34%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 21 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 554 D T+LLRG++ +++E+ER +QDA+ V + + + +++ GGGA E+ +++ L+ + S+ G E Q EA A A E +PR LA+N G++ I T+ L+ H +G+ G++ TG + D + + + + K Q +A EAA ++L+IDDI++ Sbjct: 369 DVHGVTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGRE---------------------QLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQ-VRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIA 524
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578 +ACT++LRGA++ +L+E ER+L DA+ V +K+ + V GGG +E+ ++ + Q ++ G E E+ A A +P +A N G + + L+ H+ G N G+D G I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAM---------------------ESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-NTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 1.263e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 578 +ACT++LRGA++ +L+E ER+L DA+ V +K+ + V GGG +E+ ++ + Q ++ G E E+ A A +P +A N G + + L+ H+ G N G+D G I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAM---------------------ESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-NTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 3 Query: 27 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548 K ++L RGA+ L E ER+L DA+ V R ++K L+ GGG+ E+ + L + + +EG E R F + A E IP TLA+N G+N I+ +T L+ +HANGE GI+ G ++++ E + V + A E M+++IDDI Sbjct: 372 KTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAF---------------------SEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKT-AGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 42 LLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 548 ++RGA+ +L+E ER+L DA+ V R ++K L+ GGGA E+ VS T+ ++S +++G+E ++++ F A A E IP TLA+N G+N I+ +T L+ +H +GE GI ++ + I V A E +LRIDDI Sbjct: 379 IVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQGVEAFVWQEF---------------------AEALEVIPTTLAENAGLNSIKVVTELRSRHESGETN-AGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525
BLAST of CX069699 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 48/178 (26.97%), Postives = 96/178 (53.93%), Query Frame = 3 Query: 3 FIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLR 536 FI CK+P++ ++++RG + L++E ER+++DA+S + +++ K++PGGGA E+ ++ +++ ++ + G E Q EA A A E + TL +N G++ I + L+ H + ++ ID TG + +M+E + + ++ A K EAA +++R Sbjct: 346 FIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKE---------------------QLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502 The following BLAST results are available for this feature:
BLAST of CX069699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069699 ID=CX069699; Name=CX069699; organism=Citrus sinensis; type=EST; length=840bpback to top |