CX069698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.321e-46 Identity = 101/196 (51.53%), Postives = 129/196 (65.82%), Query Frame = -3 Query: 306 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA----------NG---ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 854 DPKACT++LRG SKD+LNE+ERNL DAM V RN++ +P+L+PGGGATE+ VS L++ +EGI+ Q P+ A A E IPRTLAQNCGV+VIRT+T L+ KHA NG + W GIDG TG + DM+E +W+ ++VK QT KTA+E+ACM+LRIDDIVSG KKK Sbjct: 383 DPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQ---------------------QGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNW-GIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSKKK 556
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.842e-46 Identity = 95/185 (51.35%), Postives = 123/185 (66.49%), Query Frame = -3 Query: 306 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG--ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 854 +PKACT+LLRGASKD+LNEVERNL DA++VARNI+ +P+LVPGGGA E+ +S L +KS SIEG+ Q PY+A A + E IP+ LAQNCG N ++ +T L+ KHA EN G+DG+ G I DMK+ IWD ++VK QT KTAIE+AC +LR+D I S K+ Sbjct: 367 EPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAIEMALSQALSEKSKSIEGLH---------------------QLPYKALAQSLECIPKILAQNCGANTVKLLTELRAKHATNPTENYTYGVDGDNGTIVDMKQLGIWDTHSVKVQTLKTAIESACTMLRVDHIASAASKQ 530
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 8.560e-46 Identity = 94/184 (51.09%), Postives = 125/184 (67.93%), Query Frame = -3 Query: 303 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 854 +PKACT++LRG SKD+LNE++RNLQDAM+VARN++ +P L PGGGATE+ VS L +K+ +EGI+ QWPY+A A A E IPRTL QN G + IR ++ L+ KHA G N GIDG+ G I DM IW+ +K Q+ KTAIE+AC+LLR+DDIVSG++K++ Sbjct: 373 EPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQ---------------------QWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQG-NFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQE 534
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.044e-43 Identity = 101/199 (50.75%), Postives = 122/199 (61.31%), Query Frame = -3 Query: 270 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA----NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 854 +PKACT+LLRGASKD+LNE ERNLQDA+ VARN++ P+LV GGGA E+ S L +K ++G PY A A A E IPRTLAQNCG N IR +TAL+ KHA +G AW GIDG +G I DM IW+ VK QT+KTA+E A +LLRIDDIVSG KK+ G P+ P Sbjct: 370 EPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRK--QVKG-------------------------PYTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAW-GIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSKKR----GGNEPTNP 536
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 66/188 (35.11%), Postives = 104/188 (55.32%), Query Frame = -3 Query: 288 PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSG 851 PKA T+L+RG ++ ++ EV R + DA+ V I++ K+V GGGA E+ ++ L+ + + G E+ R F A A E +PRTLA+N G++ I + L+ KHA G NA+ G++ TG + +M E + + VK Q ++A EA MLLRIDD+++ +K + GSG Sbjct: 364 PKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAF---------------------ADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAA--EKLSGGSG 528
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.421e-24 Identity = 68/199 (34.17%), Postives = 107/199 (53.77%), Query Frame = -3 Query: 267 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG---IKKKQAPGSGQAPSKPQ 854 +PKA T+L+RG ++ ++ E+ R ++DA+ +++ K+V G GA E+ VS L++ + S+ G E Q EA A A E IPRTLA+N G++ I + L+ H G+ + G+D +TG + DMKE +++ VK Q +A E A M+LRIDDI++ K+K G G P P+ Sbjct: 368 NPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAGAPEIEVSLKLREWAPSLGGRE---------------------QLAVEAFATALEIIPRTLAENAGLDPIDVLVELKAAHEKGQK-YAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIAAKGLEKEKGGGGEGGMPEMPE 544
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24 Identity = 63/178 (35.39%), Postives = 105/178 (58.99%), Query Frame = -3 Query: 321 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 854 D K+ T++LRG ++ +++E+ER ++D++ V R +++ K++PGGGA E +S L++ + S+ G E Q EA A A + IPRTLA+N G++ I ++ L+ +H GE A G+D TG + DM+E + + VK Q ++A EAA M+LRIDD+++ Sbjct: 366 DAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGRE---------------------QLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFA-AGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIA 521
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 67/204 (32.84%), Postives = 110/204 (53.92%), Query Frame = -3 Query: 243 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++ GGGA+E+ +S L + + + G E Q EA A A + IPRTLA+N G++ I T+ + H + IGID G +DM E + + VK Q K+A EAA M+LRIDD+++ K ++ + + +D D Sbjct: 368 NPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKE---------------------QLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASKLEKEKEGEKGGGSEEFSGSSDLD 549
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 69/205 (33.66%), Postives = 110/205 (53.66%), Query Frame = -3 Query: 243 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK-KKQAPGSGQAPSKPQIETEADAD 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++ GGGA E+ +S L + + + G E Q EA A A + IPRTLA+N G++ I T+ + H + IGID G +DM E + + VK Q K+A EAA M+LRIDD+++ K +K+ G + +D D Sbjct: 368 NPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKE---------------------QLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQKLEKEKEGEKGGGGSEDFSSSSDLD 550
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 65/184 (35.33%), Postives = 97/184 (52.72%), Query Frame = -3 Query: 303 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 854 +PK+ T+LLRG + L++E ER+L DA+SV + I + K+V GGGA E V+ L + +S + G Q EA A A EA+P+ LA N G + I + L+ H EN W G+D +TG I DM + + VK K A E A ++LRIDD+++ K+++ Sbjct: 375 NPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPG---------------------KTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIAARKEEE 537 The following BLAST results are available for this feature:
BLAST of CX069698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069698 ID=CX069698; Name=CX069698; organism=Citrus sinensis; type=EST; length=856bpback to top |