CX069698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.126e-21 Identity = 63/195 (32.31%), Postives = 103/195 (52.82%), Query Frame = -3 Query: 270 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ L + + + G E F A A + IP+TLA+N G++ + + + +H N IGID G +DM E I + VK Q K+A EAA M+LRIDD+++ K P GQ P Sbjct: 368 NPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENF---------------------ADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA--KATKPEGGQGGGMP 538
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.126e-21 Identity = 63/195 (32.31%), Postives = 103/195 (52.82%), Query Frame = -3 Query: 270 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ L + + + G E F A A + IP+TLA+N G++ + + + +H N IGID G +DM E I + VK Q K+A EAA M+LRIDD+++ K P GQ P Sbjct: 368 NPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENF---------------------ADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA--KATKPEGGQGGGMP 538
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 61/181 (33.70%), Postives = 100/181 (55.25%), Query Frame = -3 Query: 312 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++P GGA E+ ++ L + + + G E Q EA A A + IPRTLA+N G++ + T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K Sbjct: 368 NPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKE---------------------QLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE-KGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 64/194 (32.99%), Postives = 105/194 (54.12%), Query Frame = -3 Query: 273 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 854 +PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ ++ L + + + G E Q EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 368 NPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKE---------------------QLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 62/197 (31.47%), Postives = 94/197 (47.72%), Query Frame = -3 Query: 270 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQAPSKP 848 K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D N I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 368 KTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPAAAGRGRGRGRP 542
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.470e-21 Identity = 62/197 (31.47%), Postives = 94/197 (47.72%), Query Frame = -3 Query: 270 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV----SGIKKKQAPGSGQAPSKP 848 K CT +LRG ++ + E ER+L DA+ + R IKN +V GGGA E+ +S L+ S +I G ++ L A A A E IPR L N G + + L+ +HA G W G+D N I+D E +W+ V+ A EAAC+++ +D+ + S + A G G+ +P Sbjct: 368 KTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLI---------------------GAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQG-GTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRP 542
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21 Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = -3 Query: 285 PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 851 PKA T+L RG+++ ++ EV R + DA+ V + ++ K+V GGGATE+ ++ L++ + S+ G E+ + F A A E IPRTLA+N G++ I + L+ H G+D G + DM E + + VK Q +A EA+ MLLRIDD+++ K K G+ Sbjct: 366 PKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAF---------------------ADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKGDEKGGE 533
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSA_SULTO (Thermosome subunit alpha OS=Sulfolobus tokodaii GN=thsA PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21 Identity = 65/192 (33.85%), Postives = 101/192 (52.60%), Query Frame = -3 Query: 285 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAIS-DMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 854 +PKA +LLRG++ L+E ER++ DA+ RN++ P +V GGGA E ++ L++ + S+ G E+ +F A A E IP LA+ G+ I+T+ L+ KHA G NA G+D G I+ DM + + VKAQ K+A+EAA +L+IDD+++ K G+ Sbjct: 374 NPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAVETELALRLREYARSVGGKEQLAIEKF---------------------AEALEEIPMILAETAGMEPIQTLMDLRAKHAKGLINA--GVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAAPLKSGEKKGE 542
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21 Identity = 62/188 (32.98%), Postives = 91/188 (48.40%), Query Frame = -3 Query: 285 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 848 + T++LRG + ++E ER+L D++ + R K+ +V GGGA E+ VS L+ S SIEG ++ L F A A E IPR +A N G + + L+ KHA GE W G+D I D E IW+ VK + A EA C++L +D+ V + +QA Q Sbjct: 368 QTATIILRGGGEQFIDEAERSLHDSIMIVRRARKHRSVVAGGGAIEMEVSKYLRDYSLSIEGKKQLLINAF---------------------AKALEVIPRQIADNAGFDSTDILNQLRQKHAQGEK-WFGVDIVNEGICDTYESAIWEPSLVKLNSIVAATEATCLILSVDETVQNNQAEQAQAGPQ 533
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21 Identity = 59/178 (33.15%), Postives = 97/178 (54.49%), Query Frame = -3 Query: 312 ACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 845 A ++LLRG++K +L E +R++ DA+ V R ++K L+PGGGA E+ ++ L+ + + G ++ +R F A A E IP TLA+N G++ I T+T L+ HANG +++ G++ G ++DM E + V A K A E +L+IDDIV ++ Sbjct: 385 AVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAF---------------------ADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSY-GVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMAVR 540 The following BLAST results are available for this feature:
BLAST of CX069698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069698 ID=CX069698; Name=CX069698; organism=Citrus sinensis; type=EST; length=856bpback to top |