CX069698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20 Identity = 54/176 (30.68%), Postives = 92/176 (52.27%), Query Frame = -3 Query: 321 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 848 KA TV +RG +K ++ E +R++ DA+ VARN+I+N +V GGGA E+ S + + G+E++ R F A A +++P LA+N G+ I T++A++ + + GID N +DM+E +++ K Q A + M+L+IDD++S Sbjct: 377 KAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKYPGVEQYAIRAF---------------------AEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 531
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = -3 Query: 321 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 848 K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 384 KTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = -3 Query: 321 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 848 K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 384 KTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = -3 Query: 321 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 848 K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 384 KTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19 Identity = 58/176 (32.95%), Postives = 92/176 (52.27%), Query Frame = -3 Query: 321 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 848 K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + R F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 384 KTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAF---------------------ADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19 Identity = 66/207 (31.88%), Postives = 102/207 (49.28%), Query Frame = -3 Query: 231 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADADSEQI 848 KA +LLRG++ L+E ER++ DA+ RNI+ P ++PGGGA EL ++ L++ + S+ G E Q EA A A E IP LA+ G+ I + L+ +HA G N + + G + D+ I + VKAQ K+A EAA +L+IDD+++ K G+ SK + E A + + Sbjct: 375 KAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKE---------------------QLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDVIGGK-IVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLIAAAPLKSEKKGGEG-SKEESGGEGGAGTPSL 558
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.797e-19 Identity = 59/203 (29.06%), Postives = 99/203 (48.77%), Query Frame = -3 Query: 249 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 854 D T++LRG++ +L++++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ ++F A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ P G P + + + D Sbjct: 369 DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKF---------------------AEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQIIMA-----KPAGGPKPPSGKKDWDDD 545
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19 Identity = 54/174 (31.03%), Postives = 93/174 (53.45%), Query Frame = -3 Query: 327 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 848 KA T+ +RG +K +++E +R L DA+ V RN++++ ++V GGG+ EL + + +++ I+GIE++ FR F A A E+IP LA+N G+ I ++ L+ K + +GID +DMKE K+ + K + A + M+L+IDD+ Sbjct: 380 KAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAF---------------------ADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19 Identity = 57/173 (32.95%), Postives = 92/173 (53.18%), Query Frame = -3 Query: 321 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 839 ++++RG++K +L E ER+L DA+ V R ++K + GGGA E+ ++ L + ++EG++ + FR F A A E IP TLA+N G+N I T+T L+ +HA GE GI+ GAI+D+ + V + A E +L+IDDI++ Sbjct: 380 SIVVRGSNKLVLEEAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAYCFRAF---------------------ANALEVIPSTLAENAGLNPIATVTELRNRHAQGEKN-AGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDIIN 530
BLAST of CX069698 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19 Identity = 60/204 (29.41%), Postives = 101/204 (49.51%), Query Frame = -3 Query: 243 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWLFRRFCYSSA*HPCFIIVKQWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 854 +PKA ++L+RG + +++E ER L+DA+ +++++ + + GGGA E ++ L++ + + G E Q EA A A E++ L +N G + I + L+ H N N W GI+ TG I DM + + VK K A EA+ ++LRIDD++S KK + G+ K + E + D Sbjct: 375 NPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKE---------------------QLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKKSE----GKTGEKKESEKGKEED 553 The following BLAST results are available for this feature:
BLAST of CX069698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069698 ID=CX069698; Name=CX069698; organism=Citrus sinensis; type=EST; length=856bpback to top |