DR403984

Overview
NameDR403984
Unique NameDR403984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9848 contig Csv1_Contig9848:65..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 54/220 (24.55%), Postives = 110/220 (50.00%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            ++ ++   E WG F +VNH +   +M  ++++        +E  +R  +++A  G  A   +    +    + +     V++ C   D     RE +  +A+ +++LA +L   L E++GL    +  +F          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG+  +V HRV
Sbjct:   21 MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCME--QRFKELVASKGLEAVQAEVTDLDWESTFFLRHLP-VSNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 53/220 (24.09%), Postives = 113/220 (51.36%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            L+K+    E WG F +VNH +S+ L+  ++++  +     +E  +R  +++A  G  A   +    +    + +    + ++     D     R+T++++A  +++LA  L   L E++GL       + +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  ++++NLGD   V +NG+  ++ HRV
Sbjct:   21 LEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTME--QRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPS-SNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 55/212 (25.94%), Postives = 101/212 (47.64%), Query Frame = 3
Query:   60 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF---RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            E WG F +VNH +   LM   +++  E   + +E K  +     G   +    ++  +E+           + D     D S   R  ++ + + ++ LA DL   L E++GL    +  VF          +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V PL  ++++NLGD   V +NGR  ++ HRV
Sbjct:   32 ENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIP---DMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLL-KDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRV 239          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 55/221 (24.89%), Postives = 110/221 (49.77%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMA-PTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPC-QFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            ++K++   E WG F +V+H + +  +  ++++  E     LE  +R  +++A  G  A  T+ N +      Y        ++     D     R  ++++A  +++LA  L   L E++GL     +      + P    +++ Y   P      G++ HTD+G L +L  D+ V GL+++ + G ++ V P+  ++++NLGD   V +NG+  +V+HRV
Sbjct:   21 MEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLE--QRFKELVASKGLEAVKTEVNDMDWESTFY--LRHLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 55/220 (25.00%), Postives = 108/220 (49.09%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGSGYMAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQF---RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRV 674
            ++K++   E WG F  VNH +S  L+ +++++  E     +E + + +    G   +     +  +E+           ++D     D     R  ++ +A  I++L+ +L   L E++GL    +  VF          +++ Y   P      G++ HTD+G + +L  D+ V GL+++ + G +V V P+  +++VNLGD   V +NG+  +V+HRV
Sbjct:   21 MEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVP---DLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRV 236          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 66/225 (29.33%), Postives = 94/225 (41.78%), Query Frame = 3
Query:   60 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLY-----DMASSQAVADFCSHLDASPHQR---ETIEKYAQAIQELAVDLAHKLAESMGLMDS-------VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            E  G F VVNH + + L+ E  + +     LPL  K+R       S GY +        K P  E L        D    + V ++      + H R   E   +Y   +  L+++L   L ES+G++          FQ      R+N Y      + + G   H D   LTIL  D +VGGLEV    G +  + P PG L+VN+GD     SN R  +  HR
Sbjct:   69 ERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAE-GRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHR 291          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 61/217 (28.11%), Postives = 100/217 (46.08%), Query Frame = 3
Query:   57 SEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKR---RNTDVIAGSGYMAPTQKNPLYEAL---GLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQDW------PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            SEEWG F+VVNH + + L+  ++ V  +  +LP   K    +  D     GY    QK+P  +      L+      +  ++       P  RE  E+YA  +++L+  L   L++ +GL     ++           +IN Y   P    + GV  HTD   +T+L  +E V GL+V  +   +   + +P  ++V++GD     SNGR  NV HR
Sbjct:   64 SEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNE-VPGLQVF-KDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHR 278          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 3
Query:   60 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 64/217 (29.49%), Postives = 93/217 (42.86%), Query Frame = 3
Query:   60 EEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKRRNTDVIAGS-GYMAP-----TQKNPLYEALGLYDMASSQA-VADFCSHLDASPHQR--ETIEKYAQAIQELAVDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            E  G F+VVNH + + L+A+  + V     +PL  K+R       S GY +        K P  E L      S  A V D+        H+R  E   +Y   +  L++++   L ES+G+        F+      R+N Y      + + G   H D   LTIL  D NVGGL+V    G +  + P     +VN+GD     SNGR  +  HR
Sbjct:   67 ERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQD-NVGGLQV-HTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHR 281          
BLAST of DR403984 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 63/228 (27.63%), Postives = 101/228 (44.30%), Query Frame = 3
Query:   36 LKKLRXXSEEWGCFRVVNHKVSSTLMAEMKQVVGELLDLPLEIKR---RNTDVIAGSGYMAPTQKNPLYEALG-------LYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELAVDLAHKLAESMGLMDSVFQ------DWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRAGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHR 671
            ++ +   S EWG F+V NH + S L+ +++ V  E  +LP E K    R  D     GY    QK    E  G       L+      +  ++       P  R   E+YA+ ++E+   L   L+  +G+   V +      D     +IN Y   P    + GV  HTD   LT+L  +E V GL+V  +   ++    +P  L++++GD   + SNG+   V HR
Sbjct:   57 VRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQK----EVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVF-KDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHR 278          
The following BLAST results are available for this feature:
BLAST of DR403984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACCO_TOBAC1.475e-1224.551-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO2_MALDO1.475e-1224.091-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_BRAJU1.927e-1225.941-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO_PRUMU2.516e-1224.891-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO1_ARATH3.286e-1225.001-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
GAOX1_ORYSJ4.292e-1229.33Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
FLS1_ARATH4.292e-1228.11Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
GAO1D_WHEAT1.631e-1129.49Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.631e-1129.49Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FLS_CITUN1.631e-1127.63Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403984 ID=DR403984; Name=DR403984; organism=Citrus sinensis; type=EST; length=686bp
GGGGGACGATAGATCTGCGGTAATTCCCGAAGCAGCTGAAGAAACTGAGA
GNNNNNAGCGAGGAATGGGGATGCTTCAGGGTGGTGAACCACAAGGTCTC
GTCAACGCTGATGGCGGAAATGAAGCAAGTGGTGGGGGAGCTTTTGGATC
TTCCTCTCGAGATCAAACGACGCAACACCGATGTGATCGCCGGCAGCGGC
TACATGGCTCCCACCCAGAAGAATCCTCTGTATGAAGCTTTGGGTCTCTA
CGACATGGCTTCTTCTCAAGCTGTTGCTGACTTTTGTTCTCACCTGGATG
CCTCTCCTCATCAGAGAGAGACAATAGAGAAATATGCTCAAGCAATACAA
GAGTTGGCCGTGGATTTGGCGCATAAATTGGCCGAGAGTATGGGGTTGAT
GGACAGTGTGTTCCAGGATTGGCCTTGCCAGTTTAGGATAAACAAGTACA
ACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAGTGCAATTACACACAGAT
TCAGGGTTCCTTACTATTCTTCAAGATGATGAAAATGTTGGTGGCCTCGA
AGTGATGGACAGAGCTGGTGCATTTGTACCTGTTGATCCCTTGCCCGGCA
CCCTCCTTGTCAATCTTGGAGACATTGCCACGGTATGGAGTAACGGAAGG
TTGCTCAATGTGAAGCATAGAGTGCAGTGCAAGGAA
back to top