CX069694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.855e-14 Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = -1 Query: 412 TTEVKSV-EMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVD 882 T EV ++ + E + ++ GD V V+ D++ GYV +++K+ P + F +Q+ I+ P + GY+ V+ HT+ V FA++L K+D+ + K +K P F G ++ P+ +E F +Y +GRF +RD TVAVG V+K +D Sbjct: 507 TLEVTAIYDEADEEISSSICGDQVRLRVRGDD-SDVQTGYVLTSTKN-PVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKILD 662
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.961e-12 Identity = 39/156 (25.00%), Postives = 77/156 (49.36%), Query Frame = -1 Query: 415 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 882 T VK + +H E + A GD+V + + + + G + K P K + F ++++I N I G+ +L T +++ +++ +G+ +K+PKFL G V++ +P+ +E + ++ LGRF +R T+A GV+ + Sbjct: 528 TCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEI 682
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12 Identity = 39/153 (25.49%), Postives = 76/153 (49.67%), Query Frame = -1 Query: 424 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVI 882 T VK + +H E + A GD+V + + + + G + K P K + F ++++I N I G+ +L T +++ +++ +G+ +K+PKFL G V++ +P+ +E + ++ LGRF +R T+A GV+ Sbjct: 528 TCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVV 679
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12 Identity = 38/156 (24.36%), Postives = 76/156 (48.72%), Query Frame = -1 Query: 415 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 882 T K + +H E + A GD+V + + + + G + K+ P K + F ++++I N I G+ +L T +++ +++ +G+ +K+PK L G V++ +P+ +E + ++ LGRF +R TVA GV+ + Sbjct: 523 TCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILIFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEI 677
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12 Identity = 37/156 (23.72%), Postives = 76/156 (48.72%), Query Frame = -1 Query: 415 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 882 T K + +H E + A GD+V + + + + G + K+ P K + F +++++ N I G+ +L T +++ +++ +G+ +K+PK L G V++ +P+ +E + ++ LGRF +R TVA GV+ + Sbjct: 526 TCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEI 680
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11 Identity = 37/156 (23.72%), Postives = 76/156 (48.72%), Query Frame = -1 Query: 415 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 882 T K + +H E + A GD+V + + + + G + K+ P K + F ++++I N I G+ +L T +++ +++ +G+ +K+PK L G V++ +P+ +E + ++ LGRF +R T+A GV+ + Sbjct: 530 TCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKE-PIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEI 684 The following BLAST results are available for this feature:
BLAST of CX069694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069694 ID=CX069694; Name=CX069694; organism=Citrus sinensis; type=EST; length=885bpback to top |