CX069694

Overview
NameCX069694
Unique NameCX069694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:907..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 2.231e-68
Identity = 121/164 (73.78%), Postives = 145/164 (88.41%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK +P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRRSGK  E+ PKF+K+GDA  V ++P+KP+ VE F E+PPLGRFAVRDMRQTVAVGVIK+V+ KD SG
Sbjct:  285 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASG 448          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.970e-68
Identity = 125/160 (78.12%), Postives = 142/160 (88.75%), Query Frame = -1
Query:  406 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 885
            +TTEVKSVEMHHE+L EALPGDNVGFNVKN+SVKD++RG VA +SK+DP   A +FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE +PKFLK+GDA  V+MIP KPM VETFS+YPPLGRFAVRDMRQTVAVGVIK VDKK
Sbjct:  285 VTTEVKSVEMHHEALVEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.491e-68
Identity = 127/164 (77.44%), Postives = 146/164 (89.02%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            LTTEVKSVEMHHE+L EA+PGDNVGFNVKNVSVKD++RGYVASN+K+DPAK A++FT+QVII+NHPGQIGNGYAPVLDCHT HIA KFA I TKIDRRSGKELE EPKF+K+GDA  V M P KPM VE+F++YPPLG  +  DMRQTVAVGVIKSV+KK+ +G
Sbjct:  273 LTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDIRRGYVASNAKNDPAKEAADFTAQVIILNHPGQIGNGYAPVLDCHTCHIACKFATIQTKIDRRSGKELEAEPKFIKSGDAAIVLMKPQKPMCVESFTDYPPLG-VSCGDMRQTVAVGVIKSVNKKENTG 435          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.446e-67
Identity = 120/164 (73.17%), Postives = 146/164 (89.02%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE L E LPGDNVGFNVKNVSVKD++RG VAS+SK+DPAK A++F +QVI++NHPGQIG GYAPVLDCHT+HIA KF+E++ KIDRR+GK +E  PKF+K+GDA  VK++P+KPM VE+++EYPPLGRFAVRDMRQTVAVGVIKSV+K +  G
Sbjct:  285 VTTEVKSVEMHHEQLAEGLPGDNVGFNVKNVSVKDIRRGDVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKTMEAAPKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGVIKSVEKTEGKG 448          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67
Identity = 119/164 (72.56%), Postives = 147/164 (89.63%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+E++ KIDRRSGK++E  PKF+K+GD+  VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G
Sbjct:  283 VTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67
Identity = 119/164 (72.56%), Postives = 147/164 (89.63%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+E++ KIDRRSGK++E  PKF+K+GD+  VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G
Sbjct:  283 VTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67
Identity = 119/159 (74.84%), Postives = 142/159 (89.31%), Query Frame = -1
Query:  409 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 885
            +TTEVKSVEMHHE L + +PGDNVGFNVKNVSVKD++RG VA +SK+DP  GA++FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK +E  PKF+K+GDA  VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK+VDK
Sbjct:  284 VTTEVKSVEMHHEQLAQGVPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPAGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVEASPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_CHICK (Elongation factor 1-alpha 1 OS=Gallus gallus GN=EEF1A PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67
Identity = 125/160 (78.12%), Postives = 141/160 (88.12%), Query Frame = -1
Query:  406 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 885
            +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  285 VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A2_OSCTI (Elongation factor 1-alpha 2 OS=Oscheius tipulae GN=eft-2 PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67
Identity = 122/164 (74.39%), Postives = 143/164 (87.20%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHESL EA PGDNVGFNVKNVSVKD++RG V S+SK+DPAK + +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KFAE+  K+DRR+GK++E  PKFLK+GDAG V++IPTKP+ VE F++Y PLGRFAVRDMRQTVAVGVIK V K D SG
Sbjct:  285 VTTEVKSVEMHHESLPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDPPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDDGSG 448          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67
Identity = 124/160 (77.50%), Postives = 142/160 (88.75%), Query Frame = -1
Query:  406 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 885
            +TTEVKSVEMHHE+L EA+PGDNVGFNVKNVSVKD++RG VA +SK+DP   A +FT+QVII+NHPGQIG GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  285 VTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKK 444          
The following BLAST results are available for this feature:
BLAST of CX069694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
EF1A1_DROME2.231e-6873.78Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A3_XENLA4.970e-6878.13Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A_EUGGR6.491e-6877.44Elongation factor 1-alpha OS=Euglena gracilis GN=T... [more]
EF1A_PIRIN1.446e-6773.17Elongation factor 1-alpha OS=Piriformospora indica... [more]
EF1A2_RHIRA1.888e-6772.56Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A1_RHIRA1.888e-6772.56Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_NEUCR3.221e-6774.84Elongation factor 1-alpha OS=Neurospora crassa GN=... [more]
EF1A_CHICK3.221e-6778.13Elongation factor 1-alpha 1 OS=Gallus gallus GN=EE... [more]
EF1A2_OSCTI3.221e-6774.39Elongation factor 1-alpha 2 OS=Oscheius tipulae GN... [more]
EF1A0_XENLA3.221e-6777.50Elongation factor 1-alpha, somatic form OS=Xenopus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C03-F6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069694 ID=CX069694; Name=CX069694; organism=Citrus sinensis; type=EST; length=885bp
CTTTTTTTTTCCAGAAGCCAAAAATATTTGAAAATGGCAAACTAGATAGA
ACATAAAACATCAACAAACAACATCTTAAGGAGCTCAGCAGAGACCTAAA
ACTCCTGAGCTGCTTACAAAATATCCAAGTTTGAACATGACATGGACAAC
AAAAATAGACTCAATACAGTAATCTCGCCACCGCCGATCAAGAACCCAGT
TCTGTGAACAAAAGTCTCTTGTCGATGGTGACGAATTGTAATTATAACCA
GCAAATTGACGACCCAAACATCCAACACATTTATGCCTAAAAAGAACACA
ATCTTTATTGTGATGACGCCTATAGACATTACTTGCAGACAAAGATGCCA
GCACAGTTCACTTCTTCTTCACAGCAGACTTGGTTACCTTGGCTCCAGAT
GGATCCTTCTTGTCCACGCTCTTGATGACTCCAACAGCGACGGTCTGGCG
CATGTCTCTCACAGCAAAACGACCAAGTGGGGGATATTCGGAGAAAGTTT
CCACAACCATAGGCTTGGTGGGAATCATCTTAACAAACCCAGCATCACCA
TTCTTTAAGAATTTGGGCTCCTTCTCCAGCTCCTTACCAGATCGCCTGTC
AATCTTGGTCAAGATTTCAGCAAACTTGACAGCTATGTGGGAAGTGTGGC
AATCAAGAACAGGTGCATAACCGTTTCCAATCTGGCCAGGGTGGTTCATG
ATGATAACTTGGGAGGTGAAGTTGGATGCCCCCTTGGCGGGATCGTCCTT
GGAGTTAGATGCAACGTAACCACGCTTAAGATCCTTCACTGAAACATTCT
TAACGTTGAACCCCACATTATCACCAGGAAGTGCCTCCTGGAGAGACTCA
TGGTGCATCTCAACCGACTTAACTTCCGTAGTCAA
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