CX069694

Overview
NameCX069694
Unique NameCX069694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:907..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.207e-67
Identity = 124/160 (77.50%), Postives = 141/160 (88.12%), Query Frame = -1
Query:  406 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 885
            +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  285 VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.495e-67
Identity = 118/164 (71.95%), Postives = 141/164 (85.98%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE L E LPGDNVGFNVKNVSVK+++RG VA +SK+DP KG  +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+E++ KIDRR+GK +E  PKF+K+GDA  VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV K D  G
Sbjct:  282 VTTEVKSVEMHHEQLSEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELVEKIDRRTGKSVEAAPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVAKSDKQG 445          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.495e-67
Identity = 123/164 (75.00%), Postives = 141/164 (85.98%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHESL EA PGDNVGFNVKNVSVKD++RG V S+SK+DPAK + NFT+QVI+MNHPGQI  GY PVLDCHT+HIA KFAE+  K+DRR+GK  E  PKFLK+GDAG V++IPTKP  VE+F++Y PLGRFAVRDMRQTVAVGVIKSV K D SG
Sbjct:  286 VTTEVKSVEMHHESLPEASPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKNFTAQVIVMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRTGKSTEASPKFLKSGDAGIVELIPTKPPCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVTKDDGSG 449          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_OSCTI (Elongation factor 1-alpha 1 OS=Oscheius tipulae GN=eft-1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.495e-67
Identity = 122/164 (74.39%), Postives = 143/164 (87.20%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHESL EA PGDNVGFNVKNVSVKD++RG V S+SK+DPAK + +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KFAE+  K+DRR+GK++E  PKFLK+GDAG V++IPTKP+ VE F++Y PLGRFAVRDMRQTVAVGVIK V K D SG
Sbjct:  285 VTTEVKSVEMHHESLPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDDGSG 448          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.599e-66
Identity = 120/164 (73.17%), Postives = 142/164 (86.59%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTE KSVEMHHESL EA PGDNVGF VKN+SVKDL+RGYVAS+SK+DPAK  +NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF EI +K+DRRSGK LE+EPKF+K+G+A  V+M+P KPM VE F++YPPLGRFAVRDM+QTVAVGVIK V KK+  G
Sbjct:  273 ITTECKSVEMHHESLTEAEPGDNVGFTVKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKKEQKG 436          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_CAEEL (Elongation factor 1-alpha OS=Caenorhabditis elegans GN=eft-3 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.599e-66
Identity = 122/163 (74.85%), Postives = 142/163 (87.12%), Query Frame = -1
Query:  397 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPS 885
            +TTEVKSVEMHHESL EA+PGDNVGFNVKNVSVKD++RG V S+SK DPAK A  F +QVIIMNHPGQI NGY PVLDCHT+HIA KF E+  K+DRR+GK++E  PKFLK+GDAG V++IPTKP+ VE+F++Y PLGRFAVRDMRQTVAVGVIKSV+K D S
Sbjct:  285 VTTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGS 447          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.599e-66
Identity = 120/161 (74.53%), Postives = 140/161 (86.96%), Query Frame = -1
Query:  403 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 885
            +TTEVKSVEMHHE L E LPGDNVGFNVKNVSVK+++RG VA +SK+DP KG  +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F E++ KIDRRSGK++E  PKF+K GDA  V+MIP+KPM VETF+EYPPLGRFAVRDMRQTVAVGVIKSV+K D
Sbjct:  283 VTTEVKSVEMHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66
Identity = 118/159 (74.21%), Postives = 141/159 (88.68%), Query Frame = -1
Query:  409 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 885
            +TTEVKSVEMHHE L E +PGDNVGFNVKNVSVK+++RG VA +SK+DP  GA++F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK +E+ PKF+K+GDA  VKMIP+KPM VE F+EYPPLGRFAVRDMRQTVAVGVIK V+K
Sbjct:  284 VTTEVKSVEMHHEQLSEGVPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66
Identity = 117/164 (71.34%), Postives = 144/164 (87.80%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIK+V+ K+  G
Sbjct:  285 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGG 448          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_DANRE (Elongation factor 1-alpha OS=Danio rerio GN=eef1a PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.727e-66
Identity = 123/160 (76.88%), Postives = 139/160 (86.88%), Query Frame = -1
Query:  406 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 885
            +TTEVKSVEMHHESL EA PGDNVGFNVKNVSVKD++RG VA +SK+DP   A+NF +QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKSV+KK
Sbjct:  285 VTTEVKSVEMHHESLTEATPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAANFNAQVIILNHPGQISQGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPPLGRFAVRDMRQTVAVGVIKSVEKK 444          
The following BLAST results are available for this feature:
BLAST of CX069694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
EF1A1_BOVIN4.207e-6777.50Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_AURPU5.495e-6771.95Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A3_OSCTI5.495e-6775.00Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]
EF1A1_OSCTI5.495e-6774.39Elongation factor 1-alpha 1 OS=Oscheius tipulae GN... [more]
EF1A_STYLE1.599e-6673.17Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_CAEEL1.599e-6674.85Elongation factor 1-alpha OS=Caenorhabditis elegan... [more]
EF1A_ARXAD1.599e-6674.53Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A_PODCU2.088e-6674.21Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_BOMMO2.088e-6671.34Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1[more]
EF1A_DANRE2.727e-6676.88Elongation factor 1-alpha OS=Danio rerio GN=eef1a ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C03-F6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069694 ID=CX069694; Name=CX069694; organism=Citrus sinensis; type=EST; length=885bp
CTTTTTTTTTCCAGAAGCCAAAAATATTTGAAAATGGCAAACTAGATAGA
ACATAAAACATCAACAAACAACATCTTAAGGAGCTCAGCAGAGACCTAAA
ACTCCTGAGCTGCTTACAAAATATCCAAGTTTGAACATGACATGGACAAC
AAAAATAGACTCAATACAGTAATCTCGCCACCGCCGATCAAGAACCCAGT
TCTGTGAACAAAAGTCTCTTGTCGATGGTGACGAATTGTAATTATAACCA
GCAAATTGACGACCCAAACATCCAACACATTTATGCCTAAAAAGAACACA
ATCTTTATTGTGATGACGCCTATAGACATTACTTGCAGACAAAGATGCCA
GCACAGTTCACTTCTTCTTCACAGCAGACTTGGTTACCTTGGCTCCAGAT
GGATCCTTCTTGTCCACGCTCTTGATGACTCCAACAGCGACGGTCTGGCG
CATGTCTCTCACAGCAAAACGACCAAGTGGGGGATATTCGGAGAAAGTTT
CCACAACCATAGGCTTGGTGGGAATCATCTTAACAAACCCAGCATCACCA
TTCTTTAAGAATTTGGGCTCCTTCTCCAGCTCCTTACCAGATCGCCTGTC
AATCTTGGTCAAGATTTCAGCAAACTTGACAGCTATGTGGGAAGTGTGGC
AATCAAGAACAGGTGCATAACCGTTTCCAATCTGGCCAGGGTGGTTCATG
ATGATAACTTGGGAGGTGAAGTTGGATGCCCCCTTGGCGGGATCGTCCTT
GGAGTTAGATGCAACGTAACCACGCTTAAGATCCTTCACTGAAACATTCT
TAACGTTGAACCCCACATTATCACCAGGAAGTGCCTCCTGGAGAGACTCA
TGGTGCATCTCAACCGACTTAACTTCCGTAGTCAA
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