CX069694

Overview
NameCX069694
Unique NameCX069694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:907..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A3_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-3 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 5.143e-65
Identity = 118/164 (71.95%), Postives = 145/164 (88.41%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+E++ KIDRRS K +E  PKF+K+GD+  VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G
Sbjct:  283 VTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSEK-MEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 445          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.146e-64
Identity = 119/159 (74.84%), Postives = 140/159 (88.05%), Query Frame = -1
Query:  409 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 885
            L+TEVKSVEMHHESL EALPGDNVGFNVKNVS+KD++RG VAS+SK+DPA  A++F +QVII+NHPG+I  GY PVLDCHT+HIA KFAE+L KIDRRSGK +E EPK +K+GDA  + +IP+K M VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDK
Sbjct:  287 LSTEVKSVEMHHESLPEALPGDNVGFNVKNVSIKDIRRGMVASDSKNDPAIEAASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTVAVGVIKEVDK 445          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.146e-64
Identity = 116/162 (71.60%), Postives = 140/162 (86.42%), Query Frame = -1
Query:  400 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 885
            +TTEVKSVEMHHESL   LPGDNVGFNVKNVSVKD++RG V  +SK+DP  G ++FT+QVII+NHPGQI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K  P
Sbjct:  283 VTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.146e-64
Identity = 116/162 (71.60%), Postives = 140/162 (86.42%), Query Frame = -1
Query:  400 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 885
            +TTEVKSVEMHHESL   LPGDNVGFNVKNVSVKD++RG V  +SK+DP  G ++FT+QVII+NHPGQI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K  P
Sbjct:  283 VTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64
Identity = 115/164 (70.12%), Postives = 142/164 (86.59%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            L TEVKSVEMHH  L++A+PGDNVGFNVKNVSVKD+KRG+VAS+SK+DPAK A++F +QVI+++HPGQI  GY+PV+DCHT+HIA KFA +  ++DRRSGK LE +PKF+K GDA  +KM P+KPM VE+F EYPPLGRFAVRDM+QTVAVGVIK V+KK+  G
Sbjct:  170 LQTEVKSVEMHHTQLEQAVPGDNVGFNVKNVSVKDVKRGHVASDSKNDPAKAAASFQAQVIVLHHPGQINPGYSPVVDCHTAHIACKFAVLEKRLDRRSGKALEDDPKFIKTGDAAIIKMEPSKPMCVESFIEYPPLGRFAVRDMKQTVAVGVIKGVEKKEAGG 333          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 2.552e-64
Identity = 114/161 (70.81%), Postives = 141/161 (87.58%), Query Frame = -1
Query:  403 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 885
            L TEVKSVEMHHE+L EA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P +GA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K DRR+GK  E EPK +K+GDA  + ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIKSV+ K+
Sbjct:  285 LVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKE 445          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.354e-64
Identity = 114/161 (70.81%), Postives = 138/161 (85.71%), Query Frame = -1
Query:  403 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 885
            +TTEVKSVEMHHE L++ +PGDNVGFNVKNVSVK+++RG V  ++K+DP KG ++F + VI++NHPGQI  GY+PVLDCHT+HIA +F E+L K DRRSGK+LE  PKFLK+GDA  VK +P+KPM VE FSEYPPLGRFAVRDMRQTVAVGVIKSVDK +
Sbjct:  283 VTTEVKSVEMHHEQLEQGVPGDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDKTE 443          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.354e-64
Identity = 113/164 (68.90%), Postives = 139/164 (84.76%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE + E LPGDNVGFNVKNVS+KD++RG V  +SK+DP   A++F +QVI++NHPGQIG GY PVLDCHT+HIA KFAE++ KIDRR+GK +E  PKF+K+GDA  VK++  KP+ VET+++YPPLGRFAVRDMRQTVAVGVIKSVDK +  G
Sbjct:  283 VTTEVKSVEMHHEQIPEGLPGDNVGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLDCHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTVAVGVIKSVDKTEKGG 446          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.426e-64
Identity = 112/161 (69.57%), Postives = 140/161 (86.96%), Query Frame = -1
Query:  403 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 885
            +TTEVKSVEMHHE + EA+PGDNVGFNVKNVS+KD+KRG+VAS++K+DPAKG  +FT+QVI++NHPG+I NGY+PV+DCHT+HI+ KF  I  K+D+RSGK LE+ PK +K+GDA  V M P KP+ VE F++YPPLGRFAVRDM+QTVAVGVIKSV KK+
Sbjct:  269 VTTEVKSVEMHHEQMPEAVPGDNVGFNVKNVSIKDIKRGFVASDAKNDPAKGCEDFTAQVIVLNHPGEIKNGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVAVGVIKSVTKKE 429          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.267e-63
Identity = 115/164 (70.12%), Postives = 137/164 (83.54%), Query Frame = -1
Query:  394 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 885
            +TTEVKSVEMHHE L+E +PGDNVGFNVKNVSVK+++RG V  +SK+DP K A +F + VI++NHPGQI  GY+PVLDCHT+HIA KF E+L K DRR+GK+LE  PKFLK GDA  VK +P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV K D +G
Sbjct:  283 VTTEVKSVEMHHEQLEEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNATVIVLNHPGQISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVVKSDKAG 446          
The following BLAST results are available for this feature:
BLAST of CX069694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
EF1A3_RHIRA5.143e-6571.95Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_HYDAT1.146e-6474.84Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]
EF1A2_SCHPO1.146e-6471.60Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO1.146e-6471.60Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_EIMBO1.954e-6470.12Elongation factor 1-alpha (Fragment) OS=Eimeria bo... [more]
EF1A2_DROME2.552e-6470.81Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_YEAST4.354e-6470.81Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_CRYNE4.354e-6468.90Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A_CRYPV7.426e-6469.57Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_ASHGO1.267e-6370.12Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C03-F6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069694 ID=CX069694; Name=CX069694; organism=Citrus sinensis; type=EST; length=885bp
CTTTTTTTTTCCAGAAGCCAAAAATATTTGAAAATGGCAAACTAGATAGA
ACATAAAACATCAACAAACAACATCTTAAGGAGCTCAGCAGAGACCTAAA
ACTCCTGAGCTGCTTACAAAATATCCAAGTTTGAACATGACATGGACAAC
AAAAATAGACTCAATACAGTAATCTCGCCACCGCCGATCAAGAACCCAGT
TCTGTGAACAAAAGTCTCTTGTCGATGGTGACGAATTGTAATTATAACCA
GCAAATTGACGACCCAAACATCCAACACATTTATGCCTAAAAAGAACACA
ATCTTTATTGTGATGACGCCTATAGACATTACTTGCAGACAAAGATGCCA
GCACAGTTCACTTCTTCTTCACAGCAGACTTGGTTACCTTGGCTCCAGAT
GGATCCTTCTTGTCCACGCTCTTGATGACTCCAACAGCGACGGTCTGGCG
CATGTCTCTCACAGCAAAACGACCAAGTGGGGGATATTCGGAGAAAGTTT
CCACAACCATAGGCTTGGTGGGAATCATCTTAACAAACCCAGCATCACCA
TTCTTTAAGAATTTGGGCTCCTTCTCCAGCTCCTTACCAGATCGCCTGTC
AATCTTGGTCAAGATTTCAGCAAACTTGACAGCTATGTGGGAAGTGTGGC
AATCAAGAACAGGTGCATAACCGTTTCCAATCTGGCCAGGGTGGTTCATG
ATGATAACTTGGGAGGTGAAGTTGGATGCCCCCTTGGCGGGATCGTCCTT
GGAGTTAGATGCAACGTAACCACGCTTAAGATCCTTCACTGAAACATTCT
TAACGTTGAACCCCACATTATCACCAGGAAGTGCCTCCTGGAGAGACTCA
TGGTGCATCTCAACCGACTTAACTTCCGTAGTCAA
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