CX069694

Overview
NameCX069694
Unique NameCX069694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:907..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58
Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  457 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  271 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58
Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  457 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  271 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58
Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  457 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  271 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58
Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  457 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  271 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.570e-58
Identity = 102/143 (71.33%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  457 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 885
            +TTEVKSVEMHHE+LQEA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  271 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.828e-55
Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = -1
Query:  406 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 882
            + EVKS+EMHHE LQ A PG N+GFNVKN++VK LKRG VA NSK DP   AS+FT+QVII+NHPG I  GY+PV+DCHT+HI  +FAE+  KIDRR+GK+LE  P  LK+GDA  + + P KP  VE F +YPPLGRFA RD++QTVAVGV+KSV+ K
Sbjct:  289 SAEVKSIEMHHEPLQMAFPGFNIGFNVKNIAVKSLKRGNVAGNSKSDPPTEASSFTAQVIILNHPGFIKAGYSPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHK 447          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.516e-52
Identity = 96/156 (61.54%), Postives = 126/156 (80.77%), Query Frame = -1
Query:  418 LTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKS 885
            ++TEVKSVEMHHES+ +ALPGDNVGFNV NVSV+D+ RG V  ++K+DP     +  +QVI+MNHP  I  GY PV+DCHT+HIA KF +I++++D+R+GK L + P  +KNG +   +++P+KPM VETFS+YPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  275 VSTEVKSVEMHHESIPQALPGDNVGFNVNNVSVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.374e-48
Identity = 90/159 (56.60%), Postives = 123/159 (77.36%), Query Frame = -1
Query:  406 TTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 882
            T+EVKS+E HH  L+EA PG NVGFNV+ +  K++K G+V  ++K+DP K A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  +L+K + R+GK +E+ PKFLKNG++G V+++PTKP+ VE FS+Y  LGRF +RDM++TVAVGVI+ V  K
Sbjct:  272 TSEVKSLEAHHNKLEEAEPGLNVGFNVR-LEAKEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHK 429          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.484e-43
Identity = 82/158 (51.90%), Postives = 113/158 (71.52%), Query Frame = -1
Query:  409 EVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 876
            EVKS+EMHHES+ EALPGDN+GFNV+ V   D+KRG VA ++ + P   +    F +Q+I++NHP  I  GY PVL  HT+ +AV+F ++L K+D R+G  +E+ P+F+K GD+  V + PTKPMV+E   E P LGRFA+RDM QTVA G++ S+ K
Sbjct:  269 EVKSIEMHHESMPEALPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426          
BLAST of CX069694 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.236e-43
Identity = 81/160 (50.62%), Postives = 113/160 (70.62%), Query Frame = -1
Query:  403 EVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 876
            EVKS+EMHHE +QEALPGDN+GFNV+ V   D+KRG VA ++ + P   +    F +Q+I++NHP  I  GY PVL  HT  +AV+F ++L K+D R+G  +E+ P+F+K GD+  V + PTKPMV+E   E P +GRFA+RDM QTVA G++ S+ K +
Sbjct:  269 EVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428          
The following BLAST results are available for this feature:
BLAST of CX069694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
EF1A_HELDI3.570e-5871.33Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM3.570e-5871.33Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL3.570e-5871.33Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF3.570e-5871.33Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE3.570e-5871.33Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A1_XENLA2.828e-5564.15Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_BLAHO8.516e-5261.54Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A2_EUPCR4.374e-4856.60Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_THESM2.484e-4351.90Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]
EF1A_THEON4.236e-4350.63Elongation factor 1-alpha OS=Thermococcus onnurine... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12C03-F6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069694 ID=CX069694; Name=CX069694; organism=Citrus sinensis; type=EST; length=885bp
CTTTTTTTTTCCAGAAGCCAAAAATATTTGAAAATGGCAAACTAGATAGA
ACATAAAACATCAACAAACAACATCTTAAGGAGCTCAGCAGAGACCTAAA
ACTCCTGAGCTGCTTACAAAATATCCAAGTTTGAACATGACATGGACAAC
AAAAATAGACTCAATACAGTAATCTCGCCACCGCCGATCAAGAACCCAGT
TCTGTGAACAAAAGTCTCTTGTCGATGGTGACGAATTGTAATTATAACCA
GCAAATTGACGACCCAAACATCCAACACATTTATGCCTAAAAAGAACACA
ATCTTTATTGTGATGACGCCTATAGACATTACTTGCAGACAAAGATGCCA
GCACAGTTCACTTCTTCTTCACAGCAGACTTGGTTACCTTGGCTCCAGAT
GGATCCTTCTTGTCCACGCTCTTGATGACTCCAACAGCGACGGTCTGGCG
CATGTCTCTCACAGCAAAACGACCAAGTGGGGGATATTCGGAGAAAGTTT
CCACAACCATAGGCTTGGTGGGAATCATCTTAACAAACCCAGCATCACCA
TTCTTTAAGAATTTGGGCTCCTTCTCCAGCTCCTTACCAGATCGCCTGTC
AATCTTGGTCAAGATTTCAGCAAACTTGACAGCTATGTGGGAAGTGTGGC
AATCAAGAACAGGTGCATAACCGTTTCCAATCTGGCCAGGGTGGTTCATG
ATGATAACTTGGGAGGTGAAGTTGGATGCCCCCTTGGCGGGATCGTCCTT
GGAGTTAGATGCAACGTAACCACGCTTAAGATCCTTCACTGAAACATTCT
TAACGTTGAACCCCACATTATCACCAGGAAGTGCCTCCTGGAGAGACTCA
TGGTGCATCTCAACCGACTTAACTTCCGTAGTCAA
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