DR403982

Overview
NameDR403982
Unique NameDR403982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST4A1_RAT (Sulfotransferase 4A1 OS=Rattus norvegicus GN=Sult4a1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  322 FKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYN-----NFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQFSVKMR 678
            F  RP+DV++ T PKSGT+ L+ +V+ +      +     N     P+L++      P   LD+ +         L SPR++ +H+ Y  LP  + N    ++Y+ RNPKD+ VS++QF   +R
Sbjct:   41 FPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLEY------PQPGLDIIKE--------LTSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLR 150          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST4A1_MOUSE (Sulfotransferase 4A1 OS=Mus musculus GN=Sult4a1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  322 FKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYN-----NFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQFSVKMR 678
            F  RP+DV++ T PKSGT+ L+ +V+ +      +     N     P+L++      P   LD+ +         L SPR++ +H+ Y  LP  + N    ++Y+ RNPKD+ VS++QF   +R
Sbjct:   41 FPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLEY------PQPGLDIIKE--------LTSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLR 150          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST4A1_HUMAN (Sulfotransferase 4A1 OS=Homo sapiens GN=SULT4A1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.238e-11
Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  322 FKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYN-----NFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQFSVKMR 678
            F  RP+DV++ T PKSGT+ L+ +V+ +      +     N     P+L++      P   LD+ +         L SPR++ +H+ Y  LP  + N    ++Y+ RNPKD+ VS++QF   +R
Sbjct:   41 FPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDEQLPVLEY------PQPGLDIIKE--------LTSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLR 150          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1C2_RAT (Sulfotransferase 1C2 OS=Rattus norvegicus GN=Sult1c2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 1
Query:  307 WVQ-QRFKPRPTDVYLATNPKSGTTWLKAIVFSI-----MNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            W Q Q FK +P D+ + T PKSGTTW++ IV  I     + + +       HP ++++             + + +     +P+PRIL TH+   +LP S   ++C  +Y+ RN KD  VS++ F
Sbjct:   29 WSQIQTFKAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRTIIQHRHPFIEWARPP----------QPSGVDKANAMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHF 143          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: S1C2A_RAT (Sulfotransferase 1C2A OS=Rattus norvegicus GN=Sult1c2a PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 1
Query:  307 WVQ-QRFKPRPTDVYLATNPKSGTTWLKAIVFSI-----MNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            W Q Q FK +P D+ + T PKSGTTW++ IV  I     + + +       HP+++++             + + +     +P+PRIL TH+   +LP S   ++C  +Y+ RN KD  VS++ F
Sbjct:   29 WSQIQTFKAKPDDLLICTYPKSGTTWIQEIVNMIEQNGDVEKCQRTIIQHRHPVIEWARPP----------QPSGVDKANAMPAPRILRTHLPPQLLPPSFWTNNCKYLYVARNAKDCMVSYYHF 143          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST6B1_MOUSE (Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = 1
Query:  259 YQGFWFQPKIGLEGVMWVQQRFKPRPTDVYLATNPKSGTTWLKAIVFSIM---NRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            YQG  +   +  +        F+ R  DV LA+ PK G+ W+  IV  ++   ++K+Y     + P+L+    E    M+L              PSPRIL TH+ Y+ LP+SI  +   I+ I RNPKD  VSF+ F
Sbjct:   30 YQGIPYPVTMCTQETFRALDAFEARSDDVLLASYPKCGSNWILHIVSELIFAVSKKKYA--CPEFPVLECGDAEKYQRMKL-------------FPSPRILTTHLHYDKLPQSIFKNKAKILVIFRNPKDTAVSFFHF 152          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1C2_RABIT (Sulfotransferase 1C2 OS=Oryctolagus cuniculus GN=SULT1C2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 1
Query:  307 WVQ-QRFKPRPTDVYLATNPKSGTTWLKAIVFSI-----MNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            W Q Q F+ +P D+ + T PKSGTTW++ IV  I     + + +       HP ++++             + + +   + +PSPRIL TH+   +LP S   ++C  +Y+ RN KD  VS++ F
Sbjct:   29 WGQIQSFEAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRALIQHRHPFIEWARPP----------QPSGVEKAQAMPSPRILRTHLPTRLLPPSFWENNCKFLYVARNVKDCMVSYYHF 143          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1C2_HUMAN (Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 38/125 (30.40%), Postives = 66/125 (52.80%), Query Frame = 1
Query:  307 WVQ-QRFKPRPTDVYLATNPKSGTTWLKAIVFSI-----MNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            W Q Q F+ +P D+ + T PK+GTTW++ IV  I     + + +       HP ++++             + + +   + +PSPRIL TH++  +LP S   ++C  +Y+ RN KD  VS++ F
Sbjct:   29 WSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPP----------QPSGVEKAKAMPSPRILKTHLSTQLLPPSFWENNCKFLYVARNAKDCMVSYYHF 143          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1E2_RAT (Estrogen sulfotransferase, isoform 2 OS=Rattus norvegicus GN=Ste2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 1
Query:  316 QRFKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYNNFTTDHPLLKFSPHEVVPFMEL---DLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQFSVKMR 678
            + F  RP D+ + T PKSG+TW+  IV  I           D    +      +P++E    DL     I   +   SPRI+ TH+   +LP S    +C I+Y+CRN KDV VS++ F + M+
Sbjct:   32 ETFSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDVEKCKEDAIFNR------IPYLECRNEDLING--IKQLKEKESPRIVKTHLPAKLLPASFWEKNCKIIYLCRNAKDVVVSYYYFFLIMK 147          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1C2_MOUSE (Sulfotransferase 1C2 OS=Mus musculus GN=Sult1c2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 1
Query:  307 WVQ-QRFKPRPTDVYLATNPKSGTTWLKAIVFSI-----MNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            W Q Q F+ +P D+ + T PKSGTTW++ IV  I     + + R       HP ++++             + + +     +P+PRIL TH+   +LP S   ++C  +Y+ RN KD  VS++ F
Sbjct:   29 WRQIQTFEAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCRRTIIQHRHPFIEWARPP----------QPSGVDKANEMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHF 143          
The following BLAST results are available for this feature:
BLAST of DR403982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ST4A1_RAT1.238e-1131.45Sulfotransferase 4A1 OS=Rattus norvegicus GN=Sult4... [more]
ST4A1_MOUSE1.238e-1131.45Sulfotransferase 4A1 OS=Mus musculus GN=Sult4a1 PE... [more]
ST4A1_HUMAN1.238e-1131.45Sulfotransferase 4A1 OS=Homo sapiens GN=SULT4A1 PE... [more]
ST1C2_RAT1.617e-1131.20Sulfotransferase 1C2 OS=Rattus norvegicus GN=Sult1... [more]
S1C2A_RAT2.112e-1131.20Sulfotransferase 1C2A OS=Rattus norvegicus GN=Sult... [more]
ST6B1_MOUSE2.758e-1133.33Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE... [more]
ST1C2_RABIT2.758e-1131.20Sulfotransferase 1C2 OS=Oryctolagus cuniculus GN=S... [more]
ST1C2_HUMAN2.758e-1130.40Sulfotransferase 1C2 OS=Homo sapiens GN=SULT1C2 PE... [more]
ST1E2_RAT3.602e-1133.87Estrogen sulfotransferase, isoform 2 OS=Rattus nor... [more]
ST1C2_MOUSE3.602e-1131.20Sulfotransferase 1C2 OS=Mus musculus GN=Sult1c2 PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403982 ID=DR403982; Name=DR403982; organism=Citrus sinensis; type=EST; length=682bp
GGGACTCTGAAAATGATACATTTAGGGAGATAAAATGTCTACCATAAATA
AACTTNTTTCCTTATTTTATTCGGACACATAAGCAAAATTTCTCTTAACA
CAGTCTTATTCATGGCGGCCCTTATCACAGCTCAAAACTGTTTTGTTCCC
AGACCAAAAGAAGAAGAAGAGGAAATCGAAAGAATCTACAAGGGCTACAG
AGACATAATGGCAACCCTTCCGAAATACAGAGGATGGTCAACTCTGCACC
TCTGCCAATATCAAGGCTTTTGGTTCCAACCAAAGATTGGTCTCGAAGGA
GTCATGTGGGTGCAACAACGCTTCAAGCCTCGACCAACTGACGTTTATTT
GGCTACCAATCCAAAATCTGGCACTACTTGGCTTAAAGCTATTGTTTTCT
CAATAATGAACCGAAAGCGATACAACAATTTCACAACTGATCACCCTCTG
CTTAAGTTTAGTCCGCATGAAGTTGTTCCCTTCATGGAGCTTGACCTTTT
CAGGACAACTCCTATTGCTGATCCTGAAATTCTTCCATCTCCTCGCATTT
TAGCCACCCACATAGCTTACAATATGTTACCCGAATCCATTCAGAACTCT
TCTTGTCCGATTGTTTACATATGTAGAAACCCTAAAGATGTTTTCGTTTC
TTTCTGGCAGTTCTCGGTCAAGATGAGACCAA
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