DR403982

Overview
NameDR403982
Unique NameDR403982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1E1_BOVIN (Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 1
Query:  316 QRFKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRTTP-IADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFW 657
            + F+ RP D+ + T PKSGTTWL  I+  I N         D    +      VP++E         +     + SPRI+ +H+   +LP S    +C I+Y+ RN KDV VS++
Sbjct:   32 EEFEARPDDLVIVTYPKSGTTWLSEIICMIYNNGDVEKCKEDVIFNR------VPYLECSTEHVMKGVKQLNEMASPRIVKSHLPVKLLPVSFWEKNCKIIYLSRNAKDVVVSYY 140          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1E6_RAT (Estrogen sulfotransferase, isoform 6 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 1
Query:  316 QRFKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYNNFTTDHPLLKFSPHEVVPFMEL---DLFRTTPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            + F  RP D+ + T PKSG+TW+  IV  I           D    +      +P++E    DL     I   +   SPRI+ TH+   +LP S    +C I+Y+CRN KDV VS++ F
Sbjct:   32 ETFSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDVEKCKEDAIFNR------IPYLECRNEDLING--IKQLKEKESPRIVKTHLPAKLLPASFWEKNCKIIYLCRNAKDVVVSYYYF 142          
BLAST of DR403982 vs. ExPASy Swiss-Prot
Match: ST1E1_CAVPO (Estrogen sulfotransferase OS=Cavia porcellus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 40/117 (34.19%), Postives = 58/117 (49.57%), Query Frame = 1
Query:  316 QRFKPRPTDVYLATNPKSGTTWLKAIVFSIMNRKRYNNFTTDHPLLKFSPHEVVPFMELDLFRT-TPIADPEILPSPRILATHIAYNMLPESIQNSSCPIVYICRNPKDVFVSFWQF 663
            + F+ RP D+ +A  PKSGTTW+  +V  I           D    +      VPF+E    +    +   E + SPRI+ TH+   +LP S     C ++ ICRN KDV VS++ F
Sbjct:   33 EAFQARPDDLVIAAYPKSGTTWISEVVCMIYAEGDVKKCRQDAIFNR------VPFLECRNDKMMNGVKQLEEMNSPRIIKTHLPPRLLPASFWEKRCKMICICRNAKDVAVSYYYF 143          
The following BLAST results are available for this feature:
BLAST of DR403982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ST1E1_BOVIN6.144e-1133.04Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1... [more]
ST1E6_RAT8.024e-1134.45Estrogen sulfotransferase, isoform 6 OS=Rattus nor... [more]
ST1E1_CAVPO8.024e-1134.19Estrogen sulfotransferase OS=Cavia porcellus GN=SU... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403982 ID=DR403982; Name=DR403982; organism=Citrus sinensis; type=EST; length=682bp
GGGACTCTGAAAATGATACATTTAGGGAGATAAAATGTCTACCATAAATA
AACTTNTTTCCTTATTTTATTCGGACACATAAGCAAAATTTCTCTTAACA
CAGTCTTATTCATGGCGGCCCTTATCACAGCTCAAAACTGTTTTGTTCCC
AGACCAAAAGAAGAAGAAGAGGAAATCGAAAGAATCTACAAGGGCTACAG
AGACATAATGGCAACCCTTCCGAAATACAGAGGATGGTCAACTCTGCACC
TCTGCCAATATCAAGGCTTTTGGTTCCAACCAAAGATTGGTCTCGAAGGA
GTCATGTGGGTGCAACAACGCTTCAAGCCTCGACCAACTGACGTTTATTT
GGCTACCAATCCAAAATCTGGCACTACTTGGCTTAAAGCTATTGTTTTCT
CAATAATGAACCGAAAGCGATACAACAATTTCACAACTGATCACCCTCTG
CTTAAGTTTAGTCCGCATGAAGTTGTTCCCTTCATGGAGCTTGACCTTTT
CAGGACAACTCCTATTGCTGATCCTGAAATTCTTCCATCTCCTCGCATTT
TAGCCACCCACATAGCTTACAATATGTTACCCGAATCCATTCAGAACTCT
TCTTGTCCGATTGTTTACATATGTAGAAACCCTAAAGATGTTTTCGTTTC
TTTCTGGCAGTTCTCGGTCAAGATGAGACCAA
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