DR403981

Overview
NameDR403981
Unique NameDR403981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403981 vs. ExPASy Swiss-Prot
Match: VPS29_SCHPO (Vacuolar protein sorting-associated protein 29 OS=Schizosaccharomyces pombe GN=vps29 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.052e-35
Identity = 72/156 (46.15%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  263 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDSRYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFD----VNPSFVLMDIDG 718
            IGD HIP RA  L +KF+ +L+PGKI  IIC GNL+   V++YLK +C DL + +G +D  S+ P    +T+G FK+G  +GH V+P    ++L++L R++D DIL+ G TH+F AY+ +G   +NPGSATGA +    +    + PSFVLMD+ G
Sbjct:    6 IGDFHIPDRAPKLSEKFRQLLIPGKISQIICLGNLTSTSVYEYLKHVCSDLKLVKGAFDISSKAPIAGKITLGSFKIGYTNGHLVVPQDSPEALSILAREMDADILLFGGTHKFAAYELDGCFFVNPGSATGAPNVSAVEDDEKIVPSFVLMDVQG 161          
BLAST of DR403981 vs. ExPASy Swiss-Prot
Match: PEP11_YEAST (Vacuolar protein sorting-associated protein 29 OS=Saccharomyces cerevisiae GN=VPS29 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 2
Query:  260 AIGDLHIPHRASDLPQKFKSML-VPGKIQHIICTGNLSIKEVHDYLK---SLCPDLHVTRGEYD-------------EDSR----YPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSS---FTFDVNPS 694
            A+ D HIP RA+DLP KFK +L VP KI  +   GN +  + +D+LK    +  ++ + RGE+D             ++SR     P    +  G  K+G C G+ V+P  D  SL  L RQLDVDIL+ G TH  +AY  EG   +NPGS TGA+++     FDV  S
Sbjct:    5 ALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNITIVRGEFDNGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171          
BLAST of DR403981 vs. ExPASy Swiss-Prot
Match: Y1774_METTH (Putative metallophosphoesterase MTH_1774 OS=Methanobacterium thermoautotrophicum GN=MTH_1774 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12
Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  263 IGDLHIPHRASDLPQKFKSMLVPGKIQHIICTGNLSIKEVHDYLKSLCPDLHVTRGEYDEDS--RYPETKTLTIGQFKLGICHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAYSSFTFDVNPSFVLMDIDG 718
            I D HIP RAS++P+          ++ I+  G+L+  ++   L++L P +   +G  D       P ++   I  F++G+ HG +V P GD   L  L  +L  D+L++GHTHQ    + E  V++NPGS T    +     +PS +++ IDG
Sbjct:    6 ISDTHIPDRASEIPEAVFDAF--RDVELILHAGDLTSPDILTELETLAP-VECVQGNMDRHYGIETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVLLNPGSPTVPRLT-----DPSVMVLRIDG 150          
The following BLAST results are available for this feature:
BLAST of DR403981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VPS29_SCHPO1.052e-3546.15Vacuolar protein sorting-associated protein 29 OS=... [more]
PEP11_YEAST8.650e-2239.64Vacuolar protein sorting-associated protein 29 OS=... [more]
Y1774_METTH2.789e-1231.82Putative metallophosphoesterase MTH_1774 OS=Methan... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246O08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246O08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403981 ID=DR403981; Name=DR403981; organism=Citrus sinensis; type=EST; length=728bp
GGGGATTGNNAATTATATCATTCCAGTACCCAAACACCCGGCTTATTAAA
NNNNNGGCGAAGCAACCGAACGTCCAGTTTCTGTACGTTTGGCGCTATGA
TCTACGAACTTAACTAAGAAGCCTTGCATCCTTACTTCAGCCGGTTGCTA
ATTACCAATTGCTCTTGTTCCTTAAACTAATCAGACAAGAACAGATTATG
GTGATGGGTCAATATTAAGAGAGAGGTTGCTTATTTTGTTGAAGATGGTG
TTAGTATTAGCAATCGGAGACCTTCACATTCCTCACCGTGCATCTGACCT
GCCCCAAAAGTTCAAATCTATGCTCGTTCCTGGAAAAATTCAGCACATCA
TTTGTACTGGCAATCTCTCTATCAAAGAAGTCCATGATTATTTGAAGAGT
CTTTGTCCTGATTTGCATGTCACTCGAGGTGAATATGATGAAGATTCACG
TTATCCCGAAACTAAGACACTCACCATTGGGCAATTCAAGCTTGGAATCT
GCCATGGTCATCAGGTTATTCCATGGGGGGACTTGGATTCGCTGGCAATG
CTGCAAAGGCAGTTGGATGTGGACATCCTTGTGACTGGTCATACCCATCA
GTTCAAAGCCTACAAACATGAAGGTGGTGTTGTTATAAATCCTGGCTCTG
CAACTGGTGCCTACAGTAGCTTTACATTTGATGTAAACCCAAGCTTTGTA
CTCATGGACATTGATGGTCTGCGAGTTG
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