CX069677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_STAPU (30S ribosomal protein S3, chloroplastic OS=Staurastrum punctulatum GN=rps3 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50 Identity = 101/200 (50.50%), Postives = 139/200 (69.50%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELN-CVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELT-EQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S W +P Y E LQED+K+R IK Y++K +R + GI RIEIQ++ I+V I+ GFPKL +E R++E++ +Q L + K I++ + PY ILAE+IA Q++ RV+FRK +KKAI+L EQ + KGI++QIAGRL+G EIAR+EW REGRVPLQT+ A+IDYC Y TIYGVLGI++WIF ++ Sbjct: 20 SNWCVQPSQYSELLQEDEKLRGCIKEYVRKYVRTAENYGGIDRIEIQRKTSAIKVEIHTGFPKLFVEKLGPRLKEIRREMQNTLQKSKHLKFIISLAEVEKPYAKATILAEYIAVQVERRVAFRKTIKKAIQLAKEQGNVKGIKIQIAGRLNGAEIARSEWAREGRVPLQTLRAQIDYCHYPAHTIYGVLGIRVWIFQEK 219
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_PSINU (30S ribosomal protein S3, chloroplastic OS=Psilotum nudum GN=rps3 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.205e-49 Identity = 103/201 (51.24%), Postives = 144/201 (71.64%), Query Frame = 3 Query: 3 SLWFAKPKN-YCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTK-GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 599 S WFA+ K Y + ++ED++IRN I+ Y++K+ GIARIEI ++ DLI+V I++GF LL EN R E+L+ N++K +N N+K+ + + +I PY P +LAE+IA QL+NRV FRKA+KKA+EL K GI++QIAGRL+G EIAR EW REGRVPLQTI A I+Y Y +TIYG+LGIK+WI+ +++ Sbjct: 20 SYWFAQSKKIYSKLVKEDKEIRNCIEKYVQKHTNNPFHYGGIARIEIYRKTDLIRVEIHMGFTDLLTENGGIRFEQLKSNIEKIVNSKNQKLCLILIKIDKPYTEPKVLAEYIALQLENRVVFRKAVKKALELAGNFKNKGGIKIQIAGRLNGIEIARVEWTREGRVPLQTIRAHINYYYYPAKTIYGILGIKVWIYQNDE 220
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_CHAGL (30S ribosomal protein S3, chloroplastic OS=Chaetosphaeridium globosum GN=rps3 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.924e-47 Identity = 105/233 (45.06%), Postives = 146/233 (62.66%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISS----GVEGIARIEIQKRIDLIQVIIYI-GFPKLLL-----------------------------ENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAI-ELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S WFA K + L+EDQKIR++I Y++K+IR SS G G+++IEI++ +LI V I+ GFP LL+ +N + +E++ VQ+ L N K + +++++NPY NI+AE+IA QL+NRV+FR+AMK+AI + E KGI++QI+GRL+G EIAR EW REGRVPLQT+ AKIDYC Y +T YGVLGIK+WIF E Sbjct: 20 SYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYGYSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNKNTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMKQAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYGVLGIKVWIFQGE 252
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_CHLAT (30S ribosomal protein S3, chloroplastic OS=Chlorokybus atmophyticus GN=rps3 PE=3 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.336e-40 Identity = 87/199 (43.72%), Postives = 128/199 (64.32%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 599 S WFAKP Y + LQED IRNF++ + GIARI+IQ++ D +++ + P L++ + +E L ++Q++ R+ I IT I P ++AEFIA +L+ R FR+AM++AI+ +A +GI++Q+AGRL+G EIAR+EW+REGRVPLQT+ A IDY +TIYG+LGIK+W+F EK Sbjct: 20 SHWFAKPAQYRQLLQEDNSIRNFLRTKLIN--------AGIARIDIQRKADQVEIEVRTARPGLIVGRSGKGVENLLRDLQEQFKN-KRRFRITITYIPEPDLESTLIAEFIAQRLEARAPFRRAMRQAIQRATRAGVEGIKIQVAGRLNGAEIARSEWVREGRVPLQTLRANIDYSYCQAKTIYGILGIKVWMFKGEK 209
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_RHDSA (30S ribosomal protein S3, chloroplastic OS=Rhodomonas salina GN=rps3 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.975e-40 Identity = 84/199 (42.21%), Postives = 134/199 (67.34%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 599 S WFA KNY E L ED IRN++K + +SS GI+++EI ++ D +++ I+ P +++ I+ ++ +++K +N N +I I +T + N N++AEFIA QL+ R++FR+A ++AI+ ++A+ +GI+VQ++GRL+G EIAR+EW+REGRVPLQT+ A IDY + T YG LG+K+W+F EK Sbjct: 20 SSWFASSKNYPETLAEDYAIRNYVK------VNLSSA--GISKVEIHRKSDQVELEIHTSRPGIIVGRSGSGIDTIKEDLRKIIN-KNNQIRINVTELKNVDADANLIAEFIAQQLEKRIAFRRATRQAIQRAQRANVQGIKVQVSGRLNGAEIARSEWVREGRVPLQTLRADIDYATKEADTTYGKLGVKVWVFNGEK 209
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_PORPU (30S ribosomal protein S3, chloroplastic OS=Porphyra purpurea GN=rps3 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.886e-40 Identity = 83/198 (41.92%), Postives = 130/198 (65.66%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S WFA K+Y LQED KIR+FI + IA+IEI ++ D ++V+I P ++L IE L+ ++ L+ N++I + + I++P ++AEFI QL+ RV+FR+A+++A++ ++A+T+G+++Q++GRL+G EIAR+EW+REGRVPLQT+ A IDYC T YGVLG+K+W+F E Sbjct: 20 SSWFASSKDYSVLLQEDHKIRSFIHGKLSN--------ASIAKIEINRKADQVEVLIATARPGIVLGKSGAGIESLRNSLTLILD-PNKQIRVNVVEISDPDSEATLVAEFITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTLRADIDYCHRQAHTTYGVLGVKVWLFKGE 208
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RS3_MICAN (30S ribosomal protein S3 OS=Microcystis aeruginosa (strain NIES-843) GN=rpsC PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.131e-39 Identity = 85/198 (42.93%), Postives = 130/198 (65.66%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S W+A K Y E LQED++IR Y++KN+ + GIA I I+++ D + + I+ P +++ IE+L++ +QK L R+I I + + N++AE+IA QL+ RVSFR+ +++AI+ ++A+ KGI++Q++GRL+G EIAR EW+REGRVPL T+ A IDY T TIYG+LG+K+WIF E Sbjct: 20 SCWYADAKRYPELLQEDRRIRQ----YVEKNLANA----GIADIRIERKADQVDISIHTARPGVVVGRGGTGIEQLRLGLQKALGG-QRQIRINVIEVARVDADANLIAEYIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTLRADIDYSYKTASTIYGILGVKVWIFKGE 208
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_PORYE (30S ribosomal protein S3, chloroplastic OS=Porphyra yezoensis GN=rps3 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.131e-39 Identity = 80/198 (40.40%), Postives = 131/198 (66.16%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S WFA K+Y LQED KIR+FI + + IA+IEI +++D ++++I P ++L IE L+ ++ L+ ++++ + + I +P ++AEFI QL+ RV+FR+A+++A++ ++A+T+G+++Q++GRL+G EIAR+EW+REGRVPLQT+ A IDYC T YGVLG+K+W+F E Sbjct: 20 SSWFANSKDYPVLLQEDHKIRSFIHSKLSN--------ASIAKIEINRKVDQVEILIATARPGIVLGKSGAGIESLRKSLSLILD-PSKQLRVNVVEIADPDSEATLVAEFITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTLRADIDYCHRQAHTTYGVLGVKVWLFKGE 208
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RR3_MESVI (30S ribosomal protein S3, chloroplastic OS=Mesostigma viride GN=rps3 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.519e-39 Identity = 84/197 (42.64%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 9 WFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 599 WFAKP Y ++ED NYI+K + G+ARI+IQ++ D +++ IY P L++ + IE L ++Q +L RK I IT + P ++ EFIA +L+ R FR+A+++A++ ++A +GI++Q+AGRL+G EIAR+EW+REGRVPLQT+ A IDY +TIYG++GIK+WIF EK Sbjct: 22 WFAKPSEYKFLVEED--------NYIRKYLNAKLANAGVARIDIQRKADQVEIEIYTARPGLVVGRTGKGIENLIRDLQDKLRN-KRKFRITITYLQEPDLESTLIGEFIAQRLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVREGRVPLQTLRADIDYSHCQAKTIYGIIGIKVWIFKGEK 209
BLAST of CX069677 vs. ExPASy Swiss-Prot
Match: RS3_CYAP8 (30S ribosomal protein S3 OS=Cyanothece sp. (strain PCC 8801) GN=rpsC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.633e-38 Identity = 82/198 (41.41%), Postives = 130/198 (65.66%), Query Frame = 3 Query: 3 SLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGIARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 596 S W+A K Y E LQED++IR YI KN+ + GI+ I I+++ D + + I+ P +++ IE+L++ +Q++L NR+I I + + ++AE+I QL+ RVSFR+ +++AI+ ++A+ KGI++Q++GRL+G EIAR EW+REGRVPL T+ A IDY T +TIYG+LG+K+W+F E Sbjct: 20 SCWYADSKRYPETLQEDRQIRQ----YITKNLSNA----GISDIRIERKADQVDLAIHTARPGVVVGRGGSGIEQLRLGLQQDLGG-NRQIRINVIEVQRVDADAMLIAEYITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTLRADIDYAYRTAQTIYGILGVKVWVFKGE 208 The following BLAST results are available for this feature:
BLAST of CX069677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069677 ID=CX069677; Name=CX069677; organism=Citrus sinensis; type=EST; length=821bpback to top |