CX069676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_IPOPU (30S ribosomal protein S8, chloroplastic OS=Ipomoea purpurea GN=rps8 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.057e-54 Identity = 109/136 (80.15%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIA+IITSIRNADM+RK VRIASTNITEN+V+ILLREGFIEN RK + K F VLTLRHRRNRK PYR I NLKRISRPGLRIY NY+RIP+IL GMG+VILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTNITENIVRILLREGFIENVRK--HREKNKNFFVLTLRHRRNRKRPYRNIFNLKRISRPGLRIYSNYQRIPKILGGMGVVILSTSRGIMTDREARLEGIGGEILCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_OLIPU (30S ribosomal protein S8, chloroplastic OS=Olimarabidopsis pumila GN=rps8 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.803e-54 Identity = 109/136 (80.15%), Postives = 121/136 (88.97%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKGTVRI STNITE++VKILLREGFIEN RK ++ + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRK--HRESNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_LOBMA (30S ribosomal protein S8, chloroplastic OS=Lobularia maritima GN=rps8 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.803e-54 Identity = 109/136 (80.15%), Postives = 121/136 (88.97%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKGTVRI STNITE++VKILLREGFIEN RK +N + FL+LTLRHRRN+K ++ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRK--HRENNQYFLILTLRHRRNKKESHKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_CAPBU (30S ribosomal protein S8, chloroplastic OS=Capsella bursa-pastoris GN=rps8 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.803e-54 Identity = 109/136 (80.15%), Postives = 121/136 (88.97%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKGTVRI STNITE++VKILLREGFIEN RK ++ + FL+LTLRHRRN+K Y+ ILNLKRISRPGLRIY N +RIPRIL G+GIVILSTS+GIMTDR ARL+RIGGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRK--HRESNQYFLILTLRHRRNKKESYKTILNLKRISRPGLRIYSNSQRIPRILGGIGIVILSTSQGIMTDREARLKRIGGEILCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_BUXMI (30S ribosomal protein S8, chloroplastic OS=Buxus microphylla GN=rps8 PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.803e-54 Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIA+IITSIRNADM++KGTVRIASTNITEN+VKILLREGFIEN RK ++ K FLV TLRHRR+RKGPYR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIANIITSIRNADMDKKGTVRIASTNITENIVKILLREGFIENVRK--HRESNKYFLVSTLRHRRSRKGPYRTIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 132
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_AETGR (30S ribosomal protein S8, chloroplastic OS=Aethionema grandiflora GN=rps8 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.354e-54 Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRKGTVRI STNITE++VKILLREGFIEN RK +N ++FL+LTLRHRRN+K Y+ I NLKRISRPGLRIY N +RI RIL G+GIVILSTSRGIMTDR ARL+R+GGEILCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKGTVRIGSTNITESIVKILLREGFIENVRK--HRENTQDFLILTLRHRRNKKESYKTIFNLKRISRPGLRIYSNSQRITRILGGIGIVILSTSRGIMTDREARLKRVGGEILCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_LOTJA (30S ribosomal protein S8, chloroplastic OS=Lotus japonicus GN=rps8 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 4.016e-54 Identity = 108/136 (79.41%), Postives = 118/136 (86.76%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIADIITSIRNADMNRK TV+I TNITEN VKILLREGFIEN RK ++ K FLVLTLR+RRN KG Y+ LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 1 MGKDTIADIITSIRNADMNRKRTVQIPFTNITENTVKILLREGFIENVRK--HRESDKSFLVLTLRYRRNTKGSYKTFLNLKRISTPGLRIYYNYQKIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_OENEH (30S ribosomal protein S8, chloroplastic OS=Oenothera elata subsp. hookeri GN=rps8 PE=3 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 8.946e-54 Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPI----LNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADIITSIRN DMNRKGTVRI STN+ E +VKILLREGFIEN RK +NKK FLVLTLRHRRNRKGP LNLKRISRPGLR+Y NY++IPRIL GMGIVILSTSRGIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIADIITSIRNVDMNRKGTVRIESTNMAEKIVKILLREGFIENVRK--HQENKKSFLVLTLRHRRNRKGPSPSRTFLNLNLKRISRPGLRVYSNYQKIPRILGGMGIVILSTSRGIMTDREARLEGIGGEILCYIW 138
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_LIRTU (30S ribosomal protein S8, chloroplastic OS=Liriodendron tulipifera GN=rps8 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.993e-53 Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADI+TSIRNADM++KGTVRIASTN+ E+VVKILLREGFIEN RK +N K FLV TLRHRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTSRGIMTDR ARLE IGGE+LCYIW Sbjct: 1 MGRDTIADILTSIRNADMDKKGTVRIASTNMAESVVKILLREGFIENVRK--HRENNKYFLVSTLRHRRNRKGTYRNIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSRGIMTDREARLEGIGGEVLCYIW 132
BLAST of CX069676 vs. ExPASy Swiss-Prot
Match: RR8_CALFG (30S ribosomal protein S8, chloroplastic OS=Calycanthus floridus var. glaucus GN=rps8 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.993e-53 Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIADI+TSIRNA+M++KGTVRIASTNITEN+VKILLREGFIEN RK +N K FLV TL+HRRNRKG YR IL KRISRPGLRIY NY+RIPRIL GMGIVILSTS+GIMTDR ARLE IGGEILCYIW Sbjct: 1 MGRDTIADILTSIRNANMDKKGTVRIASTNITENIVKILLREGFIENVRK--HQENNKYFLVSTLQHRRNRKGRYRTIL--KRISRPGLRIYSNYQRIPRILGGMGIVILSTSQGIMTDREARLEGIGGEILCYIW 132 The following BLAST results are available for this feature:
BLAST of CX069676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069676 ID=CX069676; Name=CX069676; organism=Citrus sinensis; type=EST; length=877bpback to top |