DR403971

Overview
NameDR403971
Unique NameDR403971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA3_YEAST (NEDD8-activating enzyme E1 catalytic subunit OS=Saccharomyces cerevisiae GN=UBA3 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.540e-36
Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 1
Query:  226 RILVVGAGGLGCELLKDLALSGF-KNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIXLFPPQ 711
            +ILV+GAGGLGCE+LK+L +  F K + ++D+D IE++NLNRQFLF  +D+GKPKA+VAA+ V  R   + +V H   +     SFY DF  I+ GLD+IE R +IN      L  E++     E   P +DGGTEG KGH + IIPG+T C+EC+I   P Q
Sbjct:    4 KILVLGAGGLGCEILKNLTMLSFVKQVHIVDIDTIELTNLNRQFLFCDKDIGKPKAQVAAQYVNTRFPQLEVVAHVQDLTTLPPSFYKDFQFIISGLDAIEPRRFINETLVK-LTLESN----YEICIPFIDGGTEGLKGHVKTIIPGITACWECSIDTLPSQ 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_DICDI (SUMO-activating enzyme subunit 2 OS=Dictyostelium discoideum GN=uba2 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  208 DLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDI--SFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIXLFPPQ 711
            D  +  +ILVVGAGG+GCELLK+L L+GFKN+++ID+D I++SNLNRQFLFR + +G  KA++A + VM+    VNI  H   ++  +    F+  F++++  LD+I AR ++N +  S                PM++ GT G+ G   VI  G T CFEC     P Q
Sbjct:   18 DKIQTCKILVVGAGGIGCELLKNLVLTGFKNIDIIDLDTIDISNLNRQFLFRKQHIGMSKAKIAKESVMKYNEQVNITAHHGDVKSSEFGSEFFKQFDLVMNALDNISARRHVNRLCLS-------------VDVPMIESGTAGYLGQVSVIRKGKTECFECQPIAVPKQ 174          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_DANRE (SUMO-activating enzyme subunit 2 OS=Danio rerio GN=uba2 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30
Identity = 74/176 (42.05%), Postives = 107/176 (60.80%), Query Frame = 1
Query:  166 LVGPTFEPGTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            LVGP  +   +L D L    R+LVVGAGG+GCELLK+L L+GFKN+EVID+D I+VSNLNRQFLF+ + VGK KA+VA + V+      NI  +   I   D ++ F+ +F +++  LD+  AR+++N +  +                P+++ GT G+ G   VI  G T C+EC
Sbjct:    4 LVGPLRK---QLADSLSS-CRVLVVGAGGIGCELLKNLVLTGFKNIEVIDLDTIDVSNLNRQFLFQKKHVGKSKAQVAKESVLRFCPSANITAYHDSIMNPDYNVEFFRNFQLVMNALDNRAARNHVNRMCLA-------------ADIPLIESGTAGYLGQVTVIKKGQTECYEC 162          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_XENTR (SUMO-activating enzyme subunit 2 OS=Xenopus tropicalis GN=uba2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28
Identity = 65/157 (41.40%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            +R+LVVGAGG+GCELLK+L L+GF NL+VID+D I+VSNLNRQFLF+ + VG+ KA+VA + V++     NI  +   I   D ++ F+  F +++  LD+  AR+++N +  +                P+++ GT G+ G   V+  GVT C+EC
Sbjct:   18 SRLLVVGAGGIGCELLKNLVLTGFINLDVIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFCPEANITAYHDSIMNPDYNVEFFKQFTMVMNALDNNAARNHVNRMCLA-------------AGIPLIESGTAGYLGQVTVVKKGVTECYEC 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2A_XENLA (SUMO-activating enzyme subunit 2-A OS=Xenopus laevis GN=uba2-A PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.550e-28
Identity = 66/157 (42.04%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            +R+LVVGAGG+GCELLK+L L+GF NL+VID+D I+VSNLNRQFLF+ + VG+ KA+VA + V++     NI  +   I   D ++ F+  F + +  LD+  AR+++N +  +                P+++ GT G+ G   VI  GVT C+EC
Sbjct:   18 SRLLVVGAGGIGCELLKNLVLTGFTNLDVIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFCPDANITAYHDSIMNPDYNVEFFKQFTMAMNALDNNAARNHVNRMCLA-------------AGIPLIESGTAGYLGQVSVIKKGVTECYEC 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2B_XENLA (SUMO-activating enzyme subunit 2-B OS=Xenopus laevis GN=uba2-B PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27
Identity = 65/157 (41.40%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            +R+LVVGAGG+GCELLK+L L+GF NL+VID+D I+VSNLNRQFLF+ + VG+ KA+VA + V++     +I  +   I   D ++ F+  F + +  LD+  AR+++N +  +                P+++ GT G+ G   VI  GVT C+EC
Sbjct:   18 SRLLVVGAGGIGCELLKNLVLTGFTNLDVIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFCPDASITAYHDSIMNPDYNVEFFKQFTMAMNALDNNAARNHVNRMCLA-------------AGIPLIESGTAGYLGQVSVIKKGVTECYEC 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_HUMAN (SUMO-activating enzyme subunit 2 OS=Homo sapiens GN=UBA2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.258e-27
Identity = 63/156 (40.38%), Postives = 98/156 (62.82%), Query Frame = 1
Query:  226 RILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            R+LVVGAGG+GCELLK+L L+GF ++++ID+D I+VSNLNRQFLF+ + VG+ KA+VA + V++     NIV +   I   D ++ F+  F +++  LD+  AR+++N +  +                P+++ GT G+ G    I  GVT C+EC
Sbjct:   19 RVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLA-------------ADVPLIESGTAGYLGQVTTIKKGVTECYEC 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_MOUSE (SUMO-activating enzyme subunit 2 OS=Mus musculus GN=Uba2 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27
Identity = 63/156 (40.38%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  226 RILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI--EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            R+LVVGAGG+GCELLK+L L+GF ++++ID+D I+VSNLNRQFLF+ + VG+ KA+VA + V++     NI  H   I   D ++ F+  F +++  LD+  AR+++N +  +                P+++ GT G+ G    I  GVT C+EC
Sbjct:   19 RVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFHPQANIEAHHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLA-------------ADVPLIESGTAGYLGQVTTIKKGVTECYEC 161          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA2_YEAST (Ubiquitin-activating enzyme E1-like OS=Saccharomyces cerevisiae GN=UBA2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKD---ISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECT 690
            +R L+VGAGG+G ELLKD+ L  F  + ++D+D I++SNLNRQFLFR +D+ +PK+  A K V +  +   +VP+   + D     + ++  F+II   LD++ AR Y+N ++  FL              P+++ GT GF G+ + IIPG T CFECT
Sbjct:   22 SRCLLVGAGGIGSELLKDIILMEFGEIHIVDLDTIDLSNLNRQFLFRQKDIKQPKSTTAVKAV-QHFNNSKLVPYQGNVMDISTFPLHWFEQFDIIFNALDNLAARRYVNKIS-QFLSL------------PLIESGTAGFDGYMQPIIPGKTECFECT 166          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA2_SCHPO (Ubiquitin-activating enzyme E1-like OS=Schizosaccharomyces pombe GN=uba2 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 61/157 (38.85%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK--DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            A++L+VGAGG+GCELLK+L +SG K + +ID+D I++SNLNRQFLFR + V +PKA VAAK        V +  +   I++   +++++  F+++   LD+++AR ++N   C                 P+++ GT GF G  +VII G T C++C
Sbjct:   26 AKVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNRQFLFRKKHVKQPKAIVAAKTASSFNPNVKLEAYHANIKEDRFNVAWFRQFDLVFNALDNLDARRHVNK-QCLLASV------------PLIESGTTGFLGQVQVIIHGKTECYDC 169          
The following BLAST results are available for this feature:
BLAST of DR403971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
UBA3_YEAST4.540e-3648.47NEDD8-activating enzyme E1 catalytic subunit OS=Sa... [more]
SAE2_DICDI4.397e-3141.18SUMO-activating enzyme subunit 2 OS=Dictyostelium ... [more]
SAE2_DANRE4.862e-3042.05SUMO-activating enzyme subunit 2 OS=Danio rerio GN... [more]
SAE2_XENTR4.550e-2841.40SUMO-activating enzyme subunit 2 OS=Xenopus tropic... [more]
SAE2A_XENLA4.550e-2842.04SUMO-activating enzyme subunit 2-A OS=Xenopus laev... [more]
SAE2B_XENLA1.729e-2741.40SUMO-activating enzyme subunit 2-B OS=Xenopus laev... [more]
SAE2_HUMAN2.258e-2740.38SUMO-activating enzyme subunit 2 OS=Homo sapiens G... [more]
SAE2_MOUSE3.852e-2740.38SUMO-activating enzyme subunit 2 OS=Mus musculus G... [more]
UBA2_YEAST1.464e-2640.25Ubiquitin-activating enzyme E1-like OS=Saccharomyc... [more]
UBA2_SCHPO4.259e-2638.85Ubiquitin-activating enzyme E1-like OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246N22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403971 ID=DR403971; Name=DR403971; organism=Citrus sinensis; type=EST; length=713bp
GGGGACAGACCCAGCGTCAAAGCCAAGCTATCAGCATATTTTCGCAACGG
CTAAATCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGC
AAATGGCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTA
CTCCGAGCCGGCAATCTCGTGGGCCCCACTTTCGAACCCGGCACAGAATT
GAGAGATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTG
GATTGGGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAAC
CTAGAGGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCA
GTTTCTTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAG
CAAAGCGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTT
TGCCGAATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCAT
TGTCCTTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAG
CATGTAGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAAACA
ATCAAACCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGCAAG
GGTTATTATACCAGGAGTCACACCGTGCTTTGAGTGTACCATCTGNCTTT
TCCCCCCTCAAGT
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