DR403971

Overview
NameDR403971
Unique NameDR403971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: SAE2_CAEEL (SUMO-activating enzyme subunit uba-2 OS=Caenorhabditis elegans GN=uba-2 PE=2 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 4.709e-25
Identity = 60/157 (38.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK--DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFEC 687
            ++ILV+GAGG+GCELLK+LA++GF+ + VID+D I++SNLNRQFLFR E V   KA  A + V +    + +      I +K  ++ F+  ++I++  LD+  AR+Y+N +                  +P++D G+ G+ G   VI+ G T C+EC
Sbjct:   14 SKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVSSSKAATATQVVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRMC-------------HAANRPLIDSGSGGYFGQVSVIMRGKTECYEC 157          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA7_HUMAN (Ubiquitin-like modifier-activating enzyme 7 OS=Homo sapiens GN=UBA7 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.780e-20
Identity = 66/183 (36.07%), Postives = 88/183 (48.09%), Query Frame = 1
Query:  232 LVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYND-----FNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE---------------CTIXLFP 705
            L+VGAG +GCELLK  AL G        L V+DMD IE SNL+RQFLFR +DVG+PKAEVAA         + ++P    ++      Y D      + +   LDS +AR Y+ A    +L             KP+++ GT G  G A V +P VT  +                CT+  FP
Sbjct:  436 LLVGAGAIGCELLKVFALVGLGAGNSGGLTVVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLTYPLDPTTEHIYGDNFFSRVDGVAAALDSFQARRYVAARCTHYL-------------KPLLEAGTSGTWGSATVFMPHVTEAYRAPASAAASEDAPYPVCTVRYFP 605          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA6_HUMAN (Ubiquitin-like modifier-activating enzyme 6 OS=Homo sapiens GN=UBA6 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19
Identity = 61/182 (33.52%), Postives = 91/182 (50.00%), Query Frame = 1
Query:  229 ILVVGAGGLGCELLKDLALSGFKN------LEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYND-----FNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            I +VG G +GCE+LK+ AL G         + V D D IE SNLNRQFLFR   + KPK+  AA   ++  S + I  H  ++     + YND      ++I+  LD++EAR Y+++   +              ++P++D GT G KGH  VI+P +T  +             CT+  FP
Sbjct:  463 IFLVGCGAIGCEMLKNFALLGVGTSKEKGMITVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAADATLKINSQIKIDAHLNKVCPTTETIYNDEFYTKQDVIITALDNVEARRYVDSRCLA-------------NLRPLLDSGTMGTKGHTEVIVPHLTESYNSHRDPPEEEIPFCTLKSFP 631          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA6_MOUSE (Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus GN=Uba6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.586e-19
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKN------LEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYND-----FNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G  L   LQ    I +VG G +GCE+LK+ AL G         + V D D IE SNLNRQFLFR   + KPK+  AA+  ++    + I  H  ++     S Y+D      +II+  LD++EAR Y+++   +              ++P++D GT G KGH  +I+P +T  +             CT+  FP
Sbjct:  451 GNTLCQKLQNL-NIFLVGCGAIGCEMLKNFALLGVGTGREKGMVTVTDPDLIEKSNLNRQFLFRPHHIQKPKSYTAAEATLKINPQLKIDAHLNKVCPATESIYSDEFYTKQDIIITALDNVEARRYVDSRCLA-------------NLRPLLDSGTMGTKGHTEIIVPQLTESYNSHRDPPEEEIPFCTLKSFP 631          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKN-----LEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVM----ERVSGVNIVPHFCRIEDKDI---SFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            +++ +VG+G +GCE+LK+ AL G  +     + V D D IE SNLNRQFLFR +DVGK K+EVAA+ V     +    +N        E ++I   SF+   + +   LD+++AR+Y++   C F              KP+++ GT G KG+ +VIIP +T  +             CT+  FP
Sbjct:  435 SKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDR-RCVFYR------------KPLLESGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFP 606          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18
Identity = 63/176 (35.80%), Postives = 96/176 (54.55%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVA--AKRVMERVSGVNIVPHFCRI--EDKDI---SFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCF 681
            G+E ++ +   +  LV GAG +GCE+LK+ A+ G       ++ V DMD IE SNLNRQFLFR  DVGK K+E A  A  +M       I  +  R+  E + I    F+   +++   LD++EAR Y++   C F E            KP+++ GT G KG+ +V++P +T  +
Sbjct:  418 GSEFQEKIASLSTFLV-GAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQFLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNALDNVEARMYVDR-RCVFFE------------KPLLESGTLGTKGNTQVVVPHLTESY 579          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1Y_MOUSE (Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus GN=Ube1ay PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18
Identity = 63/194 (32.47%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++L++ L +  +  +VGAG +GCELLK+ A+ G        + V DMD IE SNLNRQFLFR  D+ K K+E AA  V +    + I  H  R+  +     D  F+   + +   LD+++AR Y++   C +              KP+++ GT G KG+ +V++P +T  +             CT+  FP
Sbjct:  458 GSDLQEKLGKQ-KYFLVGAGAIGCELLKNFAMIGLGCGEDGEITVTDMDTIEKSNLNRQFLFRPWDITKLKSETAAAAVRDINPHIRIFSHQNRVGPETEHVYDDDFFQKLDGVANALDNVDARLYVDR-RCVYYR------------KPLLESGTLGTKGNVQVVVPFLTESYSSSQDPPEKSIPICTLKNFP 637          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_BOVIN (Ubiquitin-like modifier-activating enzyme 1 OS=Bos taurus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.575e-18
Identity = 64/194 (32.99%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFKNLE-----VIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++L++ L +  +  +VGAG +GCELLK+ A+ G    E     V DMD IE SNLNRQFLFR  DV K K++ AA  V +    + +  H  R+        D  F+ + + +   LD+++AR Y++   C +              KP+++ GT G KG+ +V+IP +T  +             CT+  FP
Sbjct:  459 GSDLQERLGKQ-KYFLVGAGAIGCELLKNFAMIGLGCAEDGEIVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVGPDTERIYDDDFFQNLDGVTNALDNVDARMYMDR-RCVYYR------------KPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFP 638          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 66/198 (33.33%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK---------DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCF------------ECTIXLFP 705
            G+ L++ L+E A+I +VG+G LGCE LK+LAL G       NL V D D IE SNL+RQFLFR  ++G+PK+ VAA   M     +N   H   ++++         + +F+ + + +V  LD++ AR YI++  C + +            KP+++ GT G K + +++IP +T  +             CT+  FP
Sbjct:  453 GSTLQNKLEE-AKIFMVGSGALGCEFLKNLALMGISCSQNGNLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMV----INPKLHVEALQNRASPETENVFNDAFWENLDAVVNALDNVTARMYIDS-RCVYFQ------------KPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFP 632          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_RABIT (Ubiquitin-like modifier-activating enzyme 1 OS=Oryctolagus cuniculus GN=UBA1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 65/194 (33.51%), Postives = 100/194 (51.55%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGF---KNLEVI--DMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++L++ L    +  +VGAG +GCELLK+ A+ G    +N E+I  DMD IE SNLNRQFLFR  DV K K++ AA  V +    + +  H  R+        D  F+   + +   LD+++AR Y++   C +              KP+++ GT G KG+ +V+IP +T  +             CT+  FP
Sbjct:  459 GSDLQEKLGRQ-KYFLVGAGAIGCELLKNFAMIGLGCGENGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVHQMNPHIRVTSHQNRVGPDTERIYDDDFFQTLDGVANALDNVDARMYMDR-RCVYYR------------KPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFP 638          
The following BLAST results are available for this feature:
BLAST of DR403971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
SAE2_CAEEL4.709e-2538.22SUMO-activating enzyme subunit uba-2 OS=Caenorhabd... [more]
UBA7_HUMAN7.780e-2036.07Ubiquitin-like modifier-activating enzyme 7 OS=Hom... [more]
UBA6_HUMAN1.016e-1933.52Ubiquitin-like modifier-activating enzyme 6 OS=Hom... [more]
UBA6_MOUSE6.586e-1932.82Ubiquitin-like modifier-activating enzyme 6 OS=Mus... [more]
UBA1_YEAST1.467e-1834.59Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBA1_SCHPO2.503e-1835.80Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA1Y_MOUSE4.269e-1832.47Ubiquitin-like modifier-activating enzyme 1 Y OS=M... [more]
UBA1_BOVIN5.575e-1832.99Ubiquitin-like modifier-activating enzyme 1 OS=Bos... [more]
UBE12_WHEAT7.281e-1833.33Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
UBA1_RABIT7.281e-1833.51Ubiquitin-like modifier-activating enzyme 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246N22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403971 ID=DR403971; Name=DR403971; organism=Citrus sinensis; type=EST; length=713bp
GGGGACAGACCCAGCGTCAAAGCCAAGCTATCAGCATATTTTCGCAACGG
CTAAATCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGC
AAATGGCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTA
CTCCGAGCCGGCAATCTCGTGGGCCCCACTTTCGAACCCGGCACAGAATT
GAGAGATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTG
GATTGGGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAAC
CTAGAGGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCA
GTTTCTTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAG
CAAAGCGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTT
TGCCGAATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCAT
TGTCCTTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAG
CATGTAGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAAACA
ATCAAACCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGCAAG
GGTTATTATACCAGGAGTCACACCGTGCTTTGAGTGTACCATCTGNCTTT
TCCCCCCTCAAGT
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