DR403971

Overview
NameDR403971
Unique NameDR403971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_HUMAN (Ubiquitin-like modifier-activating enzyme 1 OS=Homo sapiens GN=UBA1 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 63/194 (32.47%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++L++ L +  +  +VGAG +GCELLK+ A+ G        + V DMD IE SNLNRQFLFR  DV K K++ AA  V +    + +  H  R+        D  F+ + + +   LD+++AR Y++   C +              KP+++ GT G KG+ +V+IP +T  +             CT+  FP
Sbjct:  459 GSDLQEKLGKQ-KYFLVGAGAIGCELLKNFAMIGLGCGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPHIRVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNVDARMYMDR-RCVYYR------------KPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFP 638          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 65/198 (32.83%), Postives = 107/198 (54.04%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK---------DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCF------------ECTIXLFP 705
            G++L++ L+E A+I +VG+G LGCE LK+LAL G       NL + D D IE SNL+RQFLFR  ++G+PK+ VAA   M     +N   H   ++++         + +F+ + + +V  LD++ AR YI++  C + +            KP+++ GT G K + +++IP +T  +             CT+  FP
Sbjct:  453 GSKLQNKLEE-AKIFMVGSGALGCEFLKNLALMGISCSQNGNLTLTDDDVIEKSNLSRQFLFRDWNIGQPKSTVAATAAMV----INPKLHVEALQNRASPETENVFNDAFWENLDAVVNALDNVTARMYIDS-RCVYFQ------------KPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFP 632          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 63/194 (32.47%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++L++ L +  +  +VGAG +GCELLK+ A+ G        + V DMD IE SNLNRQFLFR  DV K K++ AA  V +    + +  H  R+        D  F+ + + +   LD+++AR Y++   C +              KP+++ GT G KG+ +V+IP +T  +             CT+  FP
Sbjct:  459 GSDLQEKLGKQ-KYFLVGAGAIGCELLKNFAMIGLGCGEGGEVVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNVDARMYMDR-RCVYYR------------KPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFP 638          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_MOUSE (Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17
Identity = 63/194 (32.47%), Postives = 98/194 (50.52%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDK-----DISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            G++ ++ L +  +  +VGAG +GCELLK+ A+ G        + V DMD IE SNLNRQFLFR  DV K K++ AA  V +    + +  H  R+        D  F+ + + +   LD+I+AR Y++   C +              KP+++ GT G KG+ +V+IP +T  +             CT+  FP
Sbjct:  459 GSDFQEKLSKQ-KYFLVGAGAIGCELLKNFAMIGLGCGEGGEVVVTDMDTIEKSNLNRQFLFRPWDVTKLKSDTAAAAVRQMNPYIQVTSHQNRVGPDTERIYDDDFFQNLDGVANALDNIDARMYMDR-RCVYYR------------KPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFP 638          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBA1_DICDI (Ubiquitin-like modifier-activating enzyme 1 OS=Dictyostelium discoideum GN=uba1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17
Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = 1
Query:  217 EYARILVVGAGGLGCELLKDLALSGF----KNL-EVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDISFYND--FNI---IVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFE------------CTIXLFP 705
            E     +VGAG +GCE+LK+ A+ G     K L  V DMD IE SNLNRQFLFR  D+ + K++ AA  V      +N+  +  R+     S YN+  FN    +   LD++EAR Y+++  C +              KP+++ GT G KG+ +V++P +T  +             CT+  FP
Sbjct:  427 ENLNYFLVGAGAIGCEMLKNFAMMGLGAGPKGLVHVTDMDTIEKSNLNRQFLFRSSDIQQLKSQTAANAVRVMNPDLNVKAYSLRVGPDTESHYNEEFFNSLDGVCNALDNVEARLYMDS-QCVYYG------------KPLLESGTLGTKGNTQVVVPHLTESYSSSRDPPEKGIPVCTLHNFP 598          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.590e-15
Identity = 60/198 (30.30%), Postives = 101/198 (51.01%), Query Frame = 1
Query:  190 GTELRDDLQEYARILVVGAGGLGCELLKDLALSGFK-----NLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKDI---------SFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCF------------ECTIXLFP 705
            G++L+  ++E A   VVG+G LGCE LK+LAL G        L + D D IE SNL+RQFLFR  ++G+ K+ VAA       S +N   H   ++++           +F+   ++++  LD++ AR Y++ + C + +            KP+++ GT G K + +++IP +T  +             CT+  FP
Sbjct:  456 GSKLQKKMEE-ANTFVVGSGALGCEFLKNLALMGVSCSSKGKLTITDDDIIEKSNLSRQFLFRDWNIGQAKSTVAA----TAASAINPSLHIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMD-MRCLYFQ------------KPLLESGTLGAKCNIQMVIPHLTENYGASRDPPEKQAPMCTVHSFP 635          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: MOCS3_CULQU (Adenylyltransferase and sulfurtransferase MOCS3 OS=Culex quinquefasciatus GN=CPIJ001621 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 49/163 (30.06%), Postives = 77/163 (47.24%), Query Frame = 1
Query:  223 ARILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI-EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIXLFPP 708
            A +LVVGAGGLGC     LA +G  ++ ++D D +E++NL+RQ L     VG  K + A   + E  S + +  H  ++  D  ++    ++I+V   D++  R  +N  AC  L+            KP+V G     +G   V      PC+ C     PP
Sbjct:   71 ASVLVVGAGGLGCPSSLYLAGAGVGHIGILDYDEVELTNLHRQLLHTESTVGLTKVDSARDYLQELNSQIEVSTHHTQLTSDNALTILEQYDIVVDATDNVATRYLLND-ACVLLK------------KPLVSGSALQLEGQLTVYNHKSGPCYRCLFPNPPP 220          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: MOCS3_DANRE (Adenylyltransferase and sulfurtransferase MOCS3 OS=Danio rerio GN=mocs3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 50/161 (31.06%), Postives = 76/161 (47.20%), Query Frame = 1
Query:  229 ILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI-EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIXLFPP 708
            +LVVG GGLGC L + LA +G   L ++D D +E+SNL+RQ L      G+PKA  AA+ +    S V  VP+  ++  +  I     ++I+    D++  R  +N  AC              T +P+V       +G   V      PC+ C   + PP
Sbjct:   85 VLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDVVELSNLHRQVLHTELTQGQPKALSAAQAISRMNSTVQCVPYHLQLSRENAIQLIQQYDIVADCSDNVPTRYLVND-ACVL------------TSRPLVSASALRMEGQLTVYNYRGGPCYRCLYPIPPP 232          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: MOCS3_CAEBR (Adenylyltransferase and sulfurtransferase MOCS3 OS=Caenorhabditis briggsae GN=CBG01549 PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 50/161 (31.06%), Postives = 79/161 (49.07%), Query Frame = 1
Query:  229 ILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRIEDKD-ISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGV-TPCFECTIXLFP 705
            +L+VGAGGLGC +   L  +G   L ++D DRI + NL+RQ  ++ + VG+ K++  A  V  + SGV  V H   ++  + +  + +++I+    D++  R  IN V C  L              P+V G    + G   V   G   PC+ C   LFP
Sbjct:   40 VLIVGAGGLGCPVATYLGAAGVGTLGIVDYDRISLDNLHRQVAYKEDQVGQSKSQGLADNVKLQNSGVTTVVHNVSLDSSNAMEIFKNYDIVCDCTDNVATRYLINDV-CVLLNI------------PLVSGSALRWDGQLSVYHYGPDCPCYRC---LFP 184          
BLAST of DR403971 vs. ExPASy Swiss-Prot
Match: MOCS3_AEDAE (Adenylyltransferase and sulfurtransferase MOCS3 OS=Aedes aegypti GN=AAEL004607 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 50/161 (31.06%), Postives = 74/161 (45.96%), Query Frame = 1
Query:  229 ILVVGAGGLGCELLKDLALSGFKNLEVIDMDRIEVSNLNRQFLFRMEDVGKPKAEVAAKRVMERVSGVNIVPHFCRI-EDKDISFYNDFNIIVLGLDSIEARSYINAVACSFLEYETDDKPREETIKPMVDGGTEGFKGHARVIIPGVTPCFECTIXLFPP 708
            +LVVGAGGLGC     LA +G   + ++D D +E++NL+RQ L     VG  K E     + E  S + IV H  ++  D  +     ++I+V   D++  R  +N  AC  L+            KP+V G     +G   V      PC+ C     PP
Sbjct:   75 VLVVGAGGLGCPSALYLAGAGIGRIGILDYDEVELTNLHRQLLHTECSVGLTKVESVRSYLEELNSQIEIVTHHIQLTSDNALQTLESYDIVVDATDNVATRYLLND-ACVLLK------------KPLVSGSALQLEGQLTVYNFNGGPCYRCLFPNPPP 222          
The following BLAST results are available for this feature:
BLAST of DR403971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
UBA1_HUMAN7.281e-1832.47Ubiquitin-like modifier-activating enzyme 1 OS=Hom... [more]
UBE11_WHEAT9.510e-1832.83Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBA1_RAT9.510e-1832.47Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]
UBA1_MOUSE1.242e-1732.47Ubiquitin-like modifier-activating enzyme 1 OS=Mus... [more]
UBA1_DICDI2.767e-1734.05Ubiquitin-like modifier-activating enzyme 1 OS=Dic... [more]
UBE13_WHEAT2.590e-1530.30Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
MOCS3_CULQU5.400e-1330.06Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]
MOCS3_DANRE1.203e-1231.06Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]
MOCS3_CAEBR1.571e-1231.06Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]
MOCS3_AEDAE1.571e-1231.06Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246N22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246N22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403971 ID=DR403971; Name=DR403971; organism=Citrus sinensis; type=EST; length=713bp
GGGGACAGACCCAGCGTCAAAGCCAAGCTATCAGCATATTTTCGCAACGG
CTAAATCAGAACCAAATACAGTGATAGTAAGCGAGTGTGAGAATTGTTGC
AAATGGCTGACACGGCACCGAGCCGATCCCGAGACCTAGACAAGCTCTTA
CTCCGAGCCGGCAATCTCGTGGGCCCCACTTTCGAACCCGGCACAGAATT
GAGAGATGACTTACAAGAATATGCGCGAATTTTGGTTGTTGGAGCCGGTG
GATTGGGCTGCGAATTGTTGAAAGACTTAGCTTTATCGGGTTTTAAAAAC
CTAGAGGTCATTGATATGGACCGTATCGAAGTTTCGAATCTCAATCGCCA
GTTTCTTTTCAGGATGGAAGATGTTGGTAAGCCAAAGGCAGAGGTGGCAG
CAAAGCGTGTCATGGAGAGAGTTAGTGGTGTAAATATTGTCCCACATTTT
TGCCGAATTGAGGATAAAGACATTTCATTTTACAATGATTTTAATATCAT
TGTCCTTGGTCTCGATTCCATCGAGGCTCGGAGCTATATAAATGCTGTAG
CATGTAGTTTTCTTGAATATGAGACTGATGACAAGCCACGAGAAGAAACA
ATCAAACCCATGGTAGATGGGGGTACTGAAGGTTTTAAGGGTCATGCAAG
GGTTATTATACCAGGAGTCACACCGTGCTTTGAGTGTACCATCTGNCTTT
TCCCCCCTCAAGT
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