CX069666

Overview
NameCX069666
Unique NameCX069666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 2.324e-90
Identity = 168/228 (73.68%), Postives = 187/228 (82.02%), Query Frame = 1
Query:  145 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         + ++  CS VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V Q LGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I+N
Sbjct:   19 KDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQ-SAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN 245          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 5.178e-90
Identity = 163/228 (71.49%), Postives = 187/228 (82.02%), Query Frame = 1
Query:  145 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            +DY++PPPAPL +  EL  WS YRA IAEF+AT LFLY+TV TV+G         S  +  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGA+CG  +VKGF+ S  Y+R GGGAN +A GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+++N
Sbjct:   13 RDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSF-YDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYN 239          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.763e-90
Identity = 164/226 (72.57%), Postives = 182/226 (80.53%), Query Frame = 1
Query:  145 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            +DYK+PPPAP F+  EL+ W  YRA IAEF+AT LFLY+++LTV+G       +     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVT GL LARK+SL R V Y+V QCLGAICG G VK F+ S  Y R GGGAN +A GY KG GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSY-YTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN 240          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.763e-90
Identity = 167/226 (73.89%), Postives = 187/226 (82.74%), Query Frame = 1
Query:  145 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVS-KSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            +DY++PPPAP  +  ELK WSFYRA IAEF+AT LFLYITVLTV+G   +S+T      C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y++ QCLGAICG G VK F+ S  Y R GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N
Sbjct:   16 RDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVIGYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSY-YTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN 240          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.154e-89
Identity = 167/229 (72.93%), Postives = 191/229 (83.41%), Query Frame = 1
Query:  139 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNT-------KCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            S KDY++PPP PLF+  EL  WSFYRA IAEF+AT LFLY+T++TV+G  KS T       +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK++L RAV YMV QCLGAICG  +VK F+ S  + R GGGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAAII+N
Sbjct:   13 SGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQ-SAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYN 239          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 5.725e-89
Identity = 163/228 (71.49%), Postives = 186/228 (81.58%), Query Frame = 1
Query:  139 SDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            S KDY +PPP   FE  ELK WSFYRA IAEF+AT LFLY+TVLTV+G      ++     C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGL LA K+SL RAV YMV QCLGA CG G+VK F+ S  Y R GGGAN+++ GY  G G+GAEIIGTFVLVYTVFSATD KRNARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+I+N
Sbjct:   13 SGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQ-STYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYN 239          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.478e-89
Identity = 167/229 (72.93%), Postives = 184/229 (80.35%), Query Frame = 1
Query:  142 DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            D+DY +PPPAPL +  EL  WS YRA IAEF+AT LFLYITV TV+G         S  +  CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM  Q LGAICG  +VKGF+ S  Y R GGGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N
Sbjct:   17 DRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYN 244          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.847e-88
Identity = 161/228 (70.61%), Postives = 184/228 (80.70%), Query Frame = 1
Query:  145 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            +DY +PPPAPL +  EL  WS YRA IAEF+AT LFLY+TV TV+G        V+ ++  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVT GL LARK+SL RA+ YM  QCLGAICG  +VKGF+ S  Y+R GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+++N
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSL-YDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYN 242          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.278e-80
Identity = 146/230 (63.48%), Postives = 173/230 (75.22%), Query Frame = 1
Query:  124 GTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFN 804
            G +A +   Y +PPPAPL +  EL  WS YRA IAEFMAT +FLY+++ TV+G          C+ VG  G+AW+FG  IF LVYCT G+SGGHINPAVT GL   RKLSL R V Y+V QCLGAI GAG+VKG    + Y+ LGGGAN V+ GY+    LGAEI+GTF+LVYTVFSATD KR ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N
Sbjct:   14 GGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIM-KRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYN 242          
BLAST of CX069666 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.414e-79
Identity = 143/223 (64.13%), Postives = 174/223 (78.03%), Query Frame = 1
Query:  130 SAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 798
            S  + KDY++PPPAPL + GEL  WS YRA IAEF AT L + I+V TV+G  + + +    G+ GIAWAFGG+IF LVYCTAGISGGH+NPAVTF ++LAR++SL RA  Y + QC+GA+CGAG+ +   G   Y R GGGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++
Sbjct:    7 SGSNPKDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALV 228          
The following BLAST results are available for this feature:
BLAST of CX069666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PIP23_ORYSJ2.324e-9073.68Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_ORYSJ5.178e-9071.49Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP24_ARATH6.763e-9072.57Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP21_ARATH6.763e-9073.89Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP25_ARATH1.154e-8972.93Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP26_ARATH5.725e-8971.49Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE7.478e-8972.93Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP24_ORYSJ4.847e-8870.61Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP27_ORYSJ1.278e-8063.48Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ1.414e-7964.13Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_12A08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A08-B16-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069666 ID=CX069666; Name=CX069666; organism=Citrus sinensis; type=EST; length=806bp
CACAAACACAGCATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTC
ATCATCGTCAATGGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACA
AGTTCTCAGAGAGGCAACCCATTGGGACATCAGCTCAATCAGACAAAGAC
TACAAGGAGCCACCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTC
ATGGTCTTTTTACAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGT
TCCTCTACATCACTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACC
AAGTGCTCCACTGTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCAT
GATCTTTGCCCTTGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCA
ACCCAGCAGTGACCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACA
AGAGCTGTCTTCTACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGC
TGGTGTTGTCAAGGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTG
GTGGAGCCAATGTTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGT
GCTGAGATTATTGGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCAC
TGATGCCAAGAGAAACGCCAGAGATTCTCATGTCCCTATTTTGGCCCCCC
TCCCCATTGGATTTGCTGTTTTCTTGGTCCACCTGGCCACCATCCCCATC
ACAGGAACTGGCATCAACCCAGCTAGGAGTCTTGGAGCTGCCATCATCTT
CAACAA
back to top