CX069665

Overview
NameCX069665
Unique NameCX069665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 6.302e-92
Identity = 163/186 (87.63%), Postives = 174/186 (93.55%), Query Frame = -3
Query:  317 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSR 874
            LVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQ LGAICGAGVVKGFEG + +  L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI+FNK   W+DHWIFWVGPFIGAALAA+YHQ+VIRAIPFKS+
Sbjct:  104 LVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 289          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 6.302e-92
Identity = 166/183 (90.71%), Postives = 173/183 (94.54%), Query Frame = -3
Query:  326 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPF 874
            LVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYMVMQCLGAICGAGVVKGF     Y+RLGGGANVV  GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+N +HAW+DHWIFWVGP IGAALAA+YHQI+IRA+PF
Sbjct:  102 LVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGP-YQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRAMPF 283          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 9.099e-91
Identity = 164/186 (88.17%), Postives = 171/186 (91.94%), Query Frame = -3
Query:  317 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSR 874
            LVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYM MQCLGAICGAGVVKGF+    Y   GGGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++N+ HAW DHWIFWVGPFIGAALAA+YH +VIRAIPFKSR
Sbjct:  103 LVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGL-YMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKSR 287          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.552e-90
Identity = 161/186 (86.56%), Postives = 173/186 (93.01%), Query Frame = -3
Query:  317 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSR 874
            LVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGAICGAGVVKGF+    Y   GGGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++N+ HAW+DHWIFWVGPFIGAALAA+YH ++IRA+PFKSR
Sbjct:  103 LVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGL-YMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKSR 287          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 6.521e-89
Identity = 159/187 (85.03%), Postives = 170/187 (90.91%), Query Frame = -3
Query:  314 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 874
            LVYCTAG+SGGHINPAVTFGLLLARKLSLTRAV+Y+VMQCLGA+CGAGVVK F GS  YE  GGGAN V+ GYTKGDGLGAE++GTFVLVYTVFSATDAKR ARDSHVP LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII++  H W  HWIFWVGPF GAALAAVYHQ+V+RAIPFKS A
Sbjct:  109 LVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAF-GSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKSSA 294          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.167e-86
Identity = 157/187 (83.96%), Postives = 170/187 (90.91%), Query Frame = -3
Query:  314 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 874
            LVYCTAGISG HINPAVTFGL LARKLSLTRAVFY++MQCLGAICG GVVKGF+    Y   GG  NVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR ARDSHVPILAPLPIGFAVFLVHLAT+ ITGTGINPARSLGAA+I+N+ HAW DHWIFWVGPFIGAALAA+YHQ++IRAIPFKSR+
Sbjct:  103 LVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGL-YMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKSRS 287          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.912e-82
Identity = 146/180 (81.11%), Postives = 161/180 (89.44%), Query Frame = -3
Query:  335 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 874
            LVYCTAG+SGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I+N D AWDDHWIFWVGPFIGAA+AA YHQ V+RA
Sbjct:   94 LVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQ-SAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRA 272          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.008e-81
Identity = 145/180 (80.56%), Postives = 160/180 (88.89%), Query Frame = -3
Query:  335 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 874
            LVYCTAGISGGHINPAVTFGL LARK+SL RAV Y++ QCLGAICG G+VKGF+ S  Y R GGGAN ++ GY+KG GLGAEIIGTFVLVYTVFSATD KRNARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+I+NKD AWDD WIFWVGP IGAA+AA YHQ V+RA
Sbjct:   98 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSY-YARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRA 276          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 2.246e-81
Identity = 148/185 (80.00%), Postives = 158/185 (85.41%), Query Frame = -3
Query:  320 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 874
            LVYCTAGISGGHINPAVTFGL LARK+SL RAV YMV QCLGAICG G VK F+ S  Y+R GGGAN +A GY  G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK   WDDHWIFWVGPFIGAA+AA YHQ V+RA   KS
Sbjct:   92 LVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSY-YDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKS 275          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.934e-81
Identity = 143/185 (77.30%), Postives = 163/185 (88.11%), Query Frame = -3
Query:  320 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 874
            LVYCTAGISGGHINPAVTFGL LARK+SL RA+ Y+V QCLGAICG G+VK F+ S  ++R GGGAN +A GY++G GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+I+NKD  WDDHWIFWVGP +GAA+AA YHQ ++RA   K+
Sbjct:   99 LVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKA 282          
The following BLAST results are available for this feature:
BLAST of CX069665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PIP2_PEA6.302e-9287.63Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP1_SOLLC6.302e-9290.71Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ORYSJ9.099e-9188.17Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP15_MAIZE1.552e-9086.56Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP16_MAIZE6.521e-8985.03Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE5.167e-8683.96Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP25_MAIZE5.912e-8281.11Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_ORYSJ1.008e-8180.56Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP22_ARATH2.246e-8180.00Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_MAIZE2.934e-8177.30Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A08-B16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069665 ID=CX069665; Name=CX069665; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTTGGGTGGTGAAACTAAGCATATTTCCTAACTTCA
AATGTTTCAATGAATACTCACAATAAGAACCCTTCCAGCAGAATCGACTG
TAATAATCTGAAGATAATAACAGAATAATAGTAAAGACTAAAAAAAGAAT
CCTCCAATCAAAAGCTTAAAAAAAAAATACAGCAAAGCTAGATAATTTAC
ACACACAATTAATTAACATCTTAAACAGTTAAACACCAAATGCACATAAA
CAAAAAGACACGACAAAGAAGATACAAATTAAAAAAAAAAAGGTCCATCA
GCGAACTCTCTTAAGCCCTGGACTTGAAGGGAATGGCCCTGATGACTATC
TGGTGGTACACAGCAGCCAGTGCAGCTCCAATGAATGGTCCAACCCAGAA
GATCCAATGGTCATCCCAGGCATGGTCTTTGTTGAAGATGATGGCAGCTC
CAAGACTCCTAGCTGGGTTGATGCCAGTTCCTGTGATGGGGATGGTGGCC
AGGTGGACCAAGAAAACAGCAAATCCAATGGGGAGGGGGGCCAAAATAGG
GACATGAGAATCTCTGGCGTTTCTCTTGGCATCAGTGGCAGAGAAGACAG
TGTAAACAAGAACAAAGGTTCCAATAATCTCAGCACCAAGACCATCACCC
TTGGTGTAGCCGTGAGCAACAACATTGGCTCCACCACCCAACCTCTCGTA
GTTCTTTGAACCTTCGAATCCCTTGACAACACCAGCACCACAGATGGCAC
CAAGGCACTGCATGACCATGTAGAAGACAGCTCTTGTCAGGGAAAGCTTC
CTCGCTAGCAGCAGACCGAAGGTCACTGCTGGGTTGATGTGTCCTCCTGA
GATACCAGCAGTGCAGTAAACAAGGG
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