CX069665

Overview
NameCX069665
Unique NameCX069665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.982e-25
Identity = 66/173 (38.15%), Postives = 98/173 (56.65%), Query Frame = -3
Query:  344 AGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 859
            A +SGGH+NPAVTFG  +   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NPA S G A++      W +HW++WVGPFIGAA+AA+ +  +
Sbjct:   77 ANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.982e-25
Identity = 69/178 (38.76%), Postives = 97/178 (54.49%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGA+ GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP +GA +A++ +  V+
Sbjct:   55 LVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.676e-25
Identity = 65/178 (36.52%), Postives = 94/178 (52.81%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            +V     +SG HINPAVTF  L+  ++SL RA+FY+  Q LGA+ GA V+ G   +     L    N +  G + G     EI  T   V  +F+  D +RN R   V     L IGF++ L HL  +  TG  +NPARS   A++      + +HW++WVGP IG AL  + +  ++
Sbjct:   55 MVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.133e-24
Identity = 67/178 (37.64%), Postives = 96/178 (53.93%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     ISG H+NPAVTF  L+  ++SL RA+ YMV Q LGA+ GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IGA L ++ +  ++
Sbjct:   55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.133e-24
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = -3
Query:  338 ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVK-GFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 853
            +SG HINPAVT G L+  ++S+ +A FY+++QC+GAI GA V+K   +G    +    G +           +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G  +NPARS G A++      W  HW++WVGP  G  LA + ++++ +
Sbjct:   70 LSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL---GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV---QGVWTYHWVYWVGPIAGGLLAGIIYRLIFK 232          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.480e-24
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     ISG H+NPAVTF  L+  ++SL RA+ YM  Q LGA+ GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  LA++ +  ++
Sbjct:   55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVL--YSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLASLLYDFLL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.524e-24
Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = -3
Query:  350 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQ 874
            + +    ISG H+NPAV+FGL++  +      + Y++ Q +GAI  AGV+        GFE S       G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FWV P IGAA+    ++
Sbjct:   51 MAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLAS-NGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAIGGALYR 224          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.297e-24
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     ISG H+NPAVTF  L+  ++SL RA+ Y+V Q LGA+ GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IGA L ++ +  ++
Sbjct:   55 LVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.297e-24
Identity = 69/177 (38.98%), Postives = 95/177 (53.67%), Query Frame = -3
Query:  341 VYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 871
            V  T   SG H NPAVT   L+   +SL RAV Y+  Q +GA  GA ++ G       E L  G NVV +  + G  +  E++ T  LV  VF++TD+++ +            IG +V L HL  I  TG  +NPARS G AII  K   +  HW+FWVGP +GA LA++ +  V+
Sbjct:   70 VQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETL--GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.297e-24
Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     +SG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R+           L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP +GA + ++ +  ++
Sbjct:   55 LVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAIL--HEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
The following BLAST results are available for this feature:
BLAST of CX069665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
TIP13_ARATH2.982e-2538.15Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQP2_BOVIN2.982e-2538.76Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
MIP_RANPI8.676e-2536.52Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_BOVIN1.133e-2437.64Lens fiber major intrinsic protein OS=Bos taurus G... [more]
AQP_DROME1.133e-2434.68Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
MIP_RABIT1.480e-2437.08Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQPZ_PSEPK2.524e-2436.81Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_SHEEP3.297e-2437.08Lens fiber major intrinsic protein OS=Ovis aries G... [more]
AQP6_HUMAN3.297e-2438.98Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_MOUSE3.297e-2436.52Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A08-B16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069665 ID=CX069665; Name=CX069665; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTTGGGTGGTGAAACTAAGCATATTTCCTAACTTCA
AATGTTTCAATGAATACTCACAATAAGAACCCTTCCAGCAGAATCGACTG
TAATAATCTGAAGATAATAACAGAATAATAGTAAAGACTAAAAAAAGAAT
CCTCCAATCAAAAGCTTAAAAAAAAAATACAGCAAAGCTAGATAATTTAC
ACACACAATTAATTAACATCTTAAACAGTTAAACACCAAATGCACATAAA
CAAAAAGACACGACAAAGAAGATACAAATTAAAAAAAAAAAGGTCCATCA
GCGAACTCTCTTAAGCCCTGGACTTGAAGGGAATGGCCCTGATGACTATC
TGGTGGTACACAGCAGCCAGTGCAGCTCCAATGAATGGTCCAACCCAGAA
GATCCAATGGTCATCCCAGGCATGGTCTTTGTTGAAGATGATGGCAGCTC
CAAGACTCCTAGCTGGGTTGATGCCAGTTCCTGTGATGGGGATGGTGGCC
AGGTGGACCAAGAAAACAGCAAATCCAATGGGGAGGGGGGCCAAAATAGG
GACATGAGAATCTCTGGCGTTTCTCTTGGCATCAGTGGCAGAGAAGACAG
TGTAAACAAGAACAAAGGTTCCAATAATCTCAGCACCAAGACCATCACCC
TTGGTGTAGCCGTGAGCAACAACATTGGCTCCACCACCCAACCTCTCGTA
GTTCTTTGAACCTTCGAATCCCTTGACAACACCAGCACCACAGATGGCAC
CAAGGCACTGCATGACCATGTAGAAGACAGCTCTTGTCAGGGAAAGCTTC
CTCGCTAGCAGCAGACCGAAGGTCACTGCTGGGTTGATGTGTCCTCCTGA
GATACCAGCAGTGCAGTAAACAAGGG
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