CX069665

Overview
NameCX069665
Unique NameCX069665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = -3
Query:  344 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGG-GANVVAH----GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 874
            + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GAI  A V+      K   +LGG  AN        GY+    L  E++ T   +  +  +T        S VP+  AP+ IG  + L+HL +IP+T T +NPARS G A +F  D A    W+FWV P IGA +A +  +IV
Sbjct:   50 MAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = -3
Query:  341 VYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 871
            V     +SGGH+NPAVTFG L+  ++SL RAV Y   Q LGA+    +++   G     R  G A  +A G   G  +  E + TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G G+NPAR  G A++      W  HW++W+GPF+GA LA + ++ ++
Sbjct:   82 VAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGG---ARPPGFA--LASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 65/173 (37.57%), Postives = 98/173 (56.65%), Query Frame = -3
Query:  344 AGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 859
            A ISGGH+NPAVTFG  +   +SL +A+ Y V Q LG++    ++K   G         GA  ++ G    + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++WVGP  GAA+AA+ + I+
Sbjct:   77 ANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAAL-----GAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.636e-23
Identity = 66/177 (37.29%), Postives = 92/177 (51.98%), Query Frame = -3
Query:  359 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 874
            + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   50 MAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23
Identity = 69/185 (37.30%), Postives = 99/185 (53.51%), Query Frame = -3
Query:  335 VYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVIRA 871
            V   A +SGGH+NPAVT GL +   +++   +FY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF LVYTV+ +A D K+ +    + ++AP+ IGF V    LA  P +G  +NPARS G A+       +  +WI+W GP IG ALA  +Y  + I A
Sbjct:   71 VSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITA 239          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.137e-23
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = -3
Query:  341 ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 853
            +SGGH+NPAV+FG L+  ++S+ RAV+Y + Q LG+I  A V++               N+   G+    G+G       E++ TF L+YTV+ +A D KR A    V  +APL IG  V    L   P  G  +NPA + G +++      W  HWIFWVGP +GAALAA+ ++  +
Sbjct:   79 VSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN-----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEYAV 238          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 67/170 (39.41%), Postives = 94/170 (55.29%), Query Frame = -3
Query:  353 AGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYH 859
            A ISGGH+NPAVTFGL +  ++++   VFY + Q LG+     ++K   G      L    + VA G    +G+  EII TF LVYTV+ +A D K+ +    +  +APL IG  V    LA  P +G  +NPARS G A+       +  HW++WVGP IG  LA + +
Sbjct:   75 ANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 64/178 (35.96%), Postives = 93/178 (52.25%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGA+ GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   53 LVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.791e-23
Identity = 64/178 (35.96%), Postives = 93/178 (52.25%), Query Frame = -3
Query:  341 LVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 874
            LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGA+ GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   55 LVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CX069665 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.761e-23
Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = -3
Query:  344 AGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEG--SKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 859
            A ISGGH+NPAVTFGL L  ++++   VFY + Q LGAI GA +V+   G  +  +   G GA          +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+       + + WI+WVGP +G  LA + ++ V
Sbjct:   76 ANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
The following BLAST results are available for this feature:
BLAST of CX069665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
AQPZ1_RHIME1.253e-2337.70Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
TIP32_MAIZE1.636e-2337.08Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP12_MAIZE1.636e-2337.57Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQPZ_BRUME1.636e-2337.29Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP_ANTMA2.137e-2337.30Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIPA_PHAVU2.137e-2337.64Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP21_ARATH2.791e-2339.41Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
MIP_RAT2.791e-2335.96Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE2.791e-2335.96Lens fiber major intrinsic protein OS=Mus musculus... [more]
TIP22_ORYSJ4.761e-2340.00Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A08-B16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069665 ID=CX069665; Name=CX069665; organism=Citrus sinensis; type=EST; length=876bp
TTTTTTTTTTTTTTTTTGGGTGGTGAAACTAAGCATATTTCCTAACTTCA
AATGTTTCAATGAATACTCACAATAAGAACCCTTCCAGCAGAATCGACTG
TAATAATCTGAAGATAATAACAGAATAATAGTAAAGACTAAAAAAAGAAT
CCTCCAATCAAAAGCTTAAAAAAAAAATACAGCAAAGCTAGATAATTTAC
ACACACAATTAATTAACATCTTAAACAGTTAAACACCAAATGCACATAAA
CAAAAAGACACGACAAAGAAGATACAAATTAAAAAAAAAAAGGTCCATCA
GCGAACTCTCTTAAGCCCTGGACTTGAAGGGAATGGCCCTGATGACTATC
TGGTGGTACACAGCAGCCAGTGCAGCTCCAATGAATGGTCCAACCCAGAA
GATCCAATGGTCATCCCAGGCATGGTCTTTGTTGAAGATGATGGCAGCTC
CAAGACTCCTAGCTGGGTTGATGCCAGTTCCTGTGATGGGGATGGTGGCC
AGGTGGACCAAGAAAACAGCAAATCCAATGGGGAGGGGGGCCAAAATAGG
GACATGAGAATCTCTGGCGTTTCTCTTGGCATCAGTGGCAGAGAAGACAG
TGTAAACAAGAACAAAGGTTCCAATAATCTCAGCACCAAGACCATCACCC
TTGGTGTAGCCGTGAGCAACAACATTGGCTCCACCACCCAACCTCTCGTA
GTTCTTTGAACCTTCGAATCCCTTGACAACACCAGCACCACAGATGGCAC
CAAGGCACTGCATGACCATGTAGAAGACAGCTCTTGTCAGGGAAAGCTTC
CTCGCTAGCAGCAGACCGAAGGTCACTGCTGGGTTGATGTGTCCTCCTGA
GATACCAGCAGTGCAGTAAACAAGGG
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