CX069663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069663 vs. ExPASy Swiss-Prot
Match: TBG2_DROME (Tubulin gamma-2 chain OS=Drosophila melanogaster GN=gammaTub37C PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.612e-18 Identity = 59/216 (27.31%), Postives = 112/216 (51.85%), Query Frame = 3 Query: 3 FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS--RGSQQYRALTVPELTQQMWDAKNMMCAA-DPRHGR--YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 626 F +N+L+S MS T LR+P +N++L L +LIP P+LHF M G+ PL S R TV ++ +++ KNMM +A + R +++ + +G++ +V + + ++ + + F+ W P +++ ++ P S ++ + N T I +F+R Q+ + +R AFL + E M + + TE + + + Q+Y+ AT Sbjct: 225 FTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYEAAT 440
BLAST of CX069663 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18 Identity = 48/198 (24.24%), Postives = 102/198 (51.52%), Query Frame = 3 Query: 3 FGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT--SRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP---RGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 581 F +N ++S M+ T LR+PG +N+DL L +L+P PR HF M G+ PL+ + R TV ++ +++ KN+M + G Y++ + +G + +V + + ++ + + F+ W P +++ ++ P G ++ + N T I+ +F+ + +Q+ +R A+++ + + E E +S+ Sbjct: 222 FPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMATGAIKKGAYMSILNIIQGDVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSKKSPYMESGHKVSGLMLANHTGIRSIFKVIYDQYRTFRKRDAYMNIFKQTKIFEDNLDEFDSS 419
BLAST of CX069663 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17 Identity = 53/202 (26.24%), Postives = 100/202 (49.50%), Query Frame = 3 Query: 9 DLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK---SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 605 D+N +IS++MS T LRFP L + L L ++L P HF M + PL R + ++ +++ +N+M + G+Y++ F+G +S E++E + ++ + FV W +K + V + RG M+ + N+TSI+ F+ + + F MF+++ +L EF E++ + ++ EY Sbjct: 222 DMNSIISSSMSAFTANLRFPSTLYNSLNSLMIHLCPSRFSHFLMTSYTPLRQVNQISSRTSAI-DVMKRLIQPQNIMARTRLKEGKYISMCDFFQGDVSYDEINEALQRFTDRRLAEFVPWNKEAIKVVHTRVSPLVKRGNRMSGMLLANNTSIRYYFQDILKAFDQMFKKRVYLQTDRDNLRKFPEFEESKEIVKCVIEEY 422
BLAST of CX069663 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16 Identity = 56/208 (26.92%), Postives = 96/208 (46.15%), Query Frame = 3 Query: 15 NHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS---RGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFI-----GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEM---EFTEAESNMNDLVSEY 605 N LI++ MS VT LRFP + + L + L+P P LHF F P TS G++ ++ L+ ++ ++D N M D YL +G + +V ++ Q + F W P ++ ++ P S S ++ N++SI +F++ F +F+R AFLH + M + EF E+ + ++ EY Sbjct: 229 NQLIASVMSSVTNSLRFPSYMYNSLPSIFSTLVPTPELHFLAPSFTPFTSDFVPGAKDFKRLSAYDVILDLFDKNNSMVTRDTDTPVYLAIYDALQGAVEQSDVTRAILKTQQRIK--FAPWSPTSLHVNLGRKSPYNSSANSDYVSGMMLANTSSIVSVFQKTVSSFDVIFKRGAFLHKFQNGKMFQHGWDEFLESREVIQGVIDEY 434 The following BLAST results are available for this feature:
BLAST of CX069663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069663 ID=CX069663; Name=CX069663; organism=Citrus sinensis; type=EST; length=885bpback to top |