CX069662

Overview
NameCX069662
Unique NameCX069662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:37..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB9 (Bifunctional protein folD OS=Shewanella baltica (strain OS195) GN=folD PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.376e-60
Identity = 129/252 (51.19%), Postives = 161/252 (63.89%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T      LVGDV +
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT------LVGDVQY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD2_MYXXD (Bifunctional protein folD 2 OS=Myxococcus xanthus (strain DK 1622) GN=folD2 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.376e-60
Identity = 129/252 (51.19%), Postives = 171/252 (67.86%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A +IDGKAVA  +R+E+  EV  L  ++G  PGLAVV VG    S+ YV+ K+KA  EVG +S+++   E +++A L+  +H+LNA P VHGILVQLPLP+HI+ + ++  +  EKDVDGFHPLN G L + GR      CTP G + LL+  G    GKRAVVVGRSNIVG P++L+LL+ +ATVTI HS + D    V  ADI++ A G A ++KG+WIKPGA VIDVG N      +K   +LVGDV+F
Sbjct:    3 AQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLL-GRSTT-RACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLLQKNATVTICHSKS-DLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMN------RKPDGKLVGDVEF 245          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB8 (Bifunctional protein folD OS=Shewanella baltica (strain OS185) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 129/252 (51.19%), Postives = 161/252 (63.89%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T      LVGDV +
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT------LVGDVQY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB5 (Bifunctional protein folD OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 129/252 (51.19%), Postives = 161/252 (63.89%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T      LVGDV +
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT------LVGDVQY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB2 (Bifunctional protein folD OS=Shewanella baltica (strain OS223) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 129/252 (51.19%), Postives = 161/252 (63.89%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T      LVGDV +
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT------LVGDVQY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPR (Bifunctional protein folD OS=Photobacterium profundum GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 125/252 (49.60%), Postives = 160/252 (63.49%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDGK +AQT+R E+A  V+   E   + PGLAVV+VG    SQ YVS KRKAC EVG  S   DLP    E EL++ ++ELN   ++ GILVQLPLP  I+   +L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L +L A AT T  H  T D E  +R+ADI++ A G+   I G WIK GA VIDVG N +D        +L GDV++
Sbjct:    3 AQIIDGKLIAQTVRQEVAARVKARVEAGLRAPGLAVVLVGQDPASQIYVSSKRKACEEVGFISQSFDLPANTKEIELLALINELNTNKEIDGILVQLPLPAGIDTTNILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIPVRGKHAVIVGASNIVGRPMTLEMLLAGATTTTCHRFTQDLEHHIRQADILVVAVGKPHFIPGDWIKEGATVIDVGINRLDSG------KLAGDVEY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_PELPB (Bifunctional protein folD OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 131/254 (51.57%), Postives = 162/254 (63.78%), Query Frame = 1
Query:   28 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV-SLLLLKADA---TVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            IIDGK V+  +++E+   V       GKVPGL V+IVG    SQ YV  K K C E+G+ S  I++ +  +E  LI  +H+LN  P VHGILVQ PLPK I+E  V   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  +GK  VVVGRSNIVG P+ +L+L K DA   TVTI HS T +      +ADI+IAA G+A  I    +KPGA VIDVG N ++D + KSGYRLVGDVDF
Sbjct:    3 IIDGKKVSLDLKNELKASVDNFRSITGKVPGLTVIIVGQDPASQVYVRNKAKTCKEIGMISTVIEMADDTTEKHLIETIHKLNNDPTVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETRGKHCVVVGRSNIVGKPMANLMLQKLDATNCTVTICHSATKNIPFYTLQADILIAAIGKAGFITADMVKPGAVVIDVGINRIEDPSTKSGYRLVGDVDF 256          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_ACTSZ (Bifunctional protein folD OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=folD PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 124/250 (49.60%), Postives = 162/250 (64.80%), Query Frame = 1
Query:   28 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            +I G  +A+  +SE+A ++R       +VPGLAV++VG    SQ YV  KRK+CAE+GI S   DLPE  +EAEL+S + +LN  P+V GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ +G  + G  AV+VG SNIVG P+++ LL A  TVT+ H  T D E  VR ADI++ A G+A  I G WIKPGA VIDVG N  +D       +L GDV +
Sbjct:    5 VISGTELAKKTKSEVAGQIRRYISLGRRVPGLAVILVGSDPASQVYVGSKRKSCAEIGIDSKSYDLPETTTEAELLSIIDDLNRNPNVDGILVQLPLPKHIDSTKVIERIAPNKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTGQDLHGLHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLEEHVRRADILVVAVGKAEFINGDWIKPGATVIDVGINRGEDG------KLRGDVQY 246          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEMY (Bifunctional protein folD 1 OS=Pseudomonas mendocina (strain ymp) GN=folD1 PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.103e-60
Identity = 126/250 (50.40%), Postives = 165/250 (66.00%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDV 771
            A +IDGKA+A ++R +IA+ V    ++  + PGLAV++VG    SQ YVS KRK C EVG  S   DLP + S+A+L++ + ELN  P + GILVQLPLP+H++   +L  I  +KDVDGFHP NIG+LA   R PL  PCTPKG + LL+ +G  + G  AVVVG SNIVG P+++ LL A  TVT+ H  T D    V +ADIV+ AAG+  ++KG WIK GA VIDVG N  +D       +LVGDV
Sbjct:    3 AQLIDGKAIAASLRQQIAQRVAERRQQGLRAPGLAVILVGTDPASQVYVSHKRKDCEEVGFLSRAYDLPAETSQADLLALIDELNEDPTIDGILVQLPLPEHLDSSLLLERIRPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLESTGADLYGMHAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGQADIVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDG------KLVGDV 244          
BLAST of CX069662 vs. ExPASy Swiss-Prot
Match: FOLD_SODGM (Bifunctional protein folD OS=Sodalis glossinidius (strain morsitans) GN=folD PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.052e-60
Identity = 126/252 (50.00%), Postives = 164/252 (65.08%), Query Frame = 1
Query:   22 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYRLVGDVDF 777
            A IIDG+AVAQ +RSE+A  ++   +   + PGLAVV+VGG   SQ YV+ KRKAC +VG  S   DLP  V+EA L++ + +LNA   V+GILVQLPLP  I+   VL  I+ +KDVDGFHP N+G+L    R PL  PCTP+G + LL+R  +   G  AVVVG SNIVG P+SL LL A  TVT+ H  T D    +  AD+++ A G+A  I G WIKPGA V+DVG N ++        ++VGDVD+
Sbjct:    3 AKIIDGRAVAQQVRSEVAARIQARLKAGKRAPGLAVVLVGGDPASQIYVASKRKACEDVGFISLSYDLPNTVTEAALLALIDQLNADHRVNGILVQLPLPAGIDNISVLERIAPDKDVDGFHPYNVGRLCQ--RAPLLRPCTPRGIVTLLERYHIDTFGLNAVVVGASNIVGRPMSLELLLAGCTVTVTHRFTRDLRRHIENADLLVVAVGKASFIPGEWIKPGAVVMDVGINRLESG------KVVGDVDY 246          
The following BLAST results are available for this feature:
BLAST of CX069662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHEB92.376e-6051.19Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD2_MYXXD2.376e-6051.19Bifunctional protein folD 2 OS=Myxococcus xanthus ... [more]
FOLD_SHEB83.103e-6051.19Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB53.103e-6051.19Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB23.103e-6051.19Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_PHOPR3.103e-6049.60Bifunctional protein folD OS=Photobacterium profun... [more]
FOLD_PELPB3.103e-6051.57Bifunctional protein folD OS=Pelodictyon phaeoclat... [more]
FOLD_ACTSZ3.103e-6049.60Bifunctional protein folD OS=Actinobacillus succin... [more]
FOLD1_PSEMY3.103e-6050.40Bifunctional protein folD 1 OS=Pseudomonas mendoci... [more]
FOLD_SODGM4.052e-6050.00Bifunctional protein folD OS=Sodalis glossinidius ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_12A06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12A06-B12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069662 ID=CX069662; Name=CX069662; organism=Citrus sinensis; type=EST; length=780bp
GCGGCACCGTCAGATCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGC
TCAGACCATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAA
AATATGGCAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAA
GACTCTCAAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGG
GATTAAGTCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGC
TTATCAGCAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATA
TTGGTTCAACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGG
TGAGATAAGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTG
GCAAGCTCGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCC
AAGGGATGCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAA
AAGGGCTGTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCAT
TGCTGCTGCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACC
CCTGATCCTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGC
CGGACAAGCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTG
TTATTGATGTTGGAACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGC
TATAGGTTAGTGGGAGATGTGGATTTCCAT
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